| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0989 |
|---|
| Symbol | |
|---|
| ID | 8121136 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 1140759 |
|---|
| End bp | 1141553 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644851380 |
|---|
| Product | cytochrome c assembly protein |
|---|
| Protein accession | YP_003003341 |
|---|
| Protein GI | 251788620 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4137] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00443363 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGTGT TCGCCATTGT AGCTTTAGCG GCCTATTTCC TCAGTCTGGG CTTGATTATT
CCCAGTCTGG TGCGAAAAAA CGGAACCTAC CGCCGTCTGG CAGTAGTATC CGCCACGATC
GCCCTGGTCT GCCATGCAGT GGCCTTGTAT CAGCGTATTT TCGATGTGCA GGTCGGTCAA
AACCTGAGCC TGTTAAATAT TGGCTCTCTG ATAAGCCTGA TTATCTGTAC CGTAATGACC
GTTGTGGCAT CGCGCAATCG CGGCTGGTTC CTGTTGCCTA TCGTCTATAC CTTTGCCTTC
ATTAATCTGG CGTTTGCCAG CTTTATGCCC GGCGAATTTA TCACCCACCT CGAAGCGATG
CCGGGCTTGA TGGTACACAT CGGTCTGGCG CTGTTTGCTT ATGCCACACT GATGATCGCC
GCGTTGTATG CGCTGCAACT GGCGTTGCTG GACTACATGC TGAAAACCAA GAAACTGGGT
TTTGCCGCCG ACATGCCGCC ATTACTGGGT ATCGAGCGCA AGATGTTCCA CATCACCCAG
GTTGGCGTCA TTTTATTAAC GTTGACGCTA TGCACCGGGC TAATCTATAT GAATGACTTG
CTCAGCAATA AAGAGAATCT GCATAAAGCG CTGTTCTCGC TGCTGGCATG GTTTGTTTAC
ATTCTTCTGC TTTGGGGACA CTACCATGAA GGCTGGCGCG GACGACGGAT TGTCTGGTTC
AACCTTATCG GCGCGTTGCT GCTGACGCTT TCCTACTTTG GCAGCCGGGT AATCCAGAAC
TTCCTGGCCC AATGA
|
|---|
| Protein sequence | MSVFAIVALA AYFLSLGLII PSLVRKNGTY RRLAVVSATI ALVCHAVALY QRIFDVQVGQ
NLSLLNIGSL ISLIICTVMT VVASRNRGWF LLPIVYTFAF INLAFASFMP GEFITHLEAM
PGLMVHIGLA LFAYATLMIA ALYALQLALL DYMLKTKKLG FAADMPPLLG IERKMFHITQ
VGVILLTLTL CTGLIYMNDL LSNKENLHKA LFSLLAWFVY ILLLWGHYHE GWRGRRIVWF
NLIGALLLTL SYFGSRVIQN FLAQ
|
|---|
| |