| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0909 |
|---|
| Symbol | |
|---|
| ID | 8117725 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 1056288 |
|---|
| End bp | 1056935 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 644851302 |
|---|
| Product | CRISPR-associated protein, Cse3 family |
|---|
| Protein accession | YP_003003267 |
|---|
| Protein GI | 251788546 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01907] CRISPR system CASCADE complex protein CasE/Cse3 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.752623 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAGC TATTCGCCAG TGCCTTACAC CTTGATCGTG CTGCTGTTAA AGCACTGAAA
ATGACCGATG CCTATTCGTT GCACCGGGTC GTGTACAGTC TGTTTTCTGA TGAACGCACA
GAAACCGAAA AACTCAGCCA TATCCAGAGC GGTATTGTTT ATGCCGATCA GGGCGGTGAT
TTTCAGCACC GCAAAGTGCT TATTGTTTCC GACCGAAGAC CGACAACACA CGTCGAGGGT
CAATATGGCA ATGTGCGCAT TACCCCAATT TCTGATGCAT TTTTGTCTCA CTCCCGCTAT
CGCTTCAAAG TACAGGTCAA TCCCGTACGC AAGGATAAAC AGAGTGGTAA ACGCATTGCA
GTCAAAGGCC GGAGCCATAT CGCCGAATGG TTTTTACAAC GAGCCGCTAA TAGTTGGGGA
TTCGAGGTAG ACCCTCAAAC CCTACAGGTA GACGCTATTG AGGTAATGCA ATTCAAAGAC
AAGGTTGGCC GTCTGGTCAC GCTTGGCAAA GCCCATATAC AAGGGCAATT CACCGTGACC
GACCCGCTGC AATTTCGCAA CAGTTTCAAG AATGGTATTG GCAAAGGGCG CGCATTTGGC
TGCGGCCTGT TGCAAATCGT GCCGATTATT GACAACCCAT TTGCCTGA
|
|---|
| Protein sequence | MTELFASALH LDRAAVKALK MTDAYSLHRV VYSLFSDERT ETEKLSHIQS GIVYADQGGD
FQHRKVLIVS DRRPTTHVEG QYGNVRITPI SDAFLSHSRY RFKVQVNPVR KDKQSGKRIA
VKGRSHIAEW FLQRAANSWG FEVDPQTLQV DAIEVMQFKD KVGRLVTLGK AHIQGQFTVT
DPLQFRNSFK NGIGKGRAFG CGLLQIVPII DNPFA
|
|---|
| |