Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_0906 |
Symbol | |
ID | 8117722 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | - |
Start bp | 1053618 |
End bp | 1054493 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644851299 |
Product | CRISPR-associated protein Cas1 |
Protein accession | YP_003003264 |
Protein GI | 251788543 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1 [TIGR03638] CRISPR-associated endonuclease Cas1, ECOLI subtype |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.16838 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTAAAG GCGAGCGGCT ATTTGTCAAA GTAACCCGTG AATCACTGCC CCAGGTAAAG GATAAATACC CTTTTTTATA TCTGGAGCGT GGGCGCTTAG AGATAGATGA CAGCAGTGTG AAGTGGGTTG ACTCAGATGC CAATGTCGTG CCCATTCCCG TTGCAACCAT CAACACATTA CTACTCGGCC CTGGCACCAC AGTAACGCAT GAAGCCGTTA AAACGGCGAC TGCCGCCAAC TGCGCTGTCT GTTGGGTAGG AGAAGATAGC CTACTTTTTT ATGCCGCTGG TTTTCTTCCT ACCGCCGACA CACGCAATCT GAAATTACAG ATGGCCCTTG CCAGTGACGA AGAGTCTTCC CTTAAGGTTG CCAGAGCGAT GTTTGCGAAA CGTTTTCCCG ATGCTGAACT GGAGGGCAAA AGCTTAAATA GCATGATGGG AATGGAAGGC AATCGGGTTC GGGCGTTATA TCAGCAAAAA GCGCAAGAGT ATGGCGTAGG CTGGAAAGGA CGCCAGTTTA CACCGGGAAA GTTTCAACTG AGTGATCTTA CCAATCAAGT GTTAACCGCC ACCAATGCGG CGCTTTACGG CATATTATGT TCGGCTGTCC ATTCCATGGG ATATTCTCCC CATATTGGAT TTATTCATTC CGGTAGCCCA TTACCGTTTG TGTACGATTT AGCCGATCTT TACAAGGAGC CGCTGTGTAT TGATCTGGCA TTTTCTCTCT CACGAGAAAT GGCTGGTCAT TATGATAAAT ACAAAGTATC TGACGCATTC AGGAAGCGAG TTATTGCCAT TGATTTGCTT AATCAAATCA CCGCAGATGT TAATGAGTTG ATGGGGGTTA AACATGCTCG TCGTACTCGC AAATGA
|
Protein sequence | MAKGERLFVK VTRESLPQVK DKYPFLYLER GRLEIDDSSV KWVDSDANVV PIPVATINTL LLGPGTTVTH EAVKTATAAN CAVCWVGEDS LLFYAAGFLP TADTRNLKLQ MALASDEESS LKVARAMFAK RFPDAELEGK SLNSMMGMEG NRVRALYQQK AQEYGVGWKG RQFTPGKFQL SDLTNQVLTA TNAALYGILC SAVHSMGYSP HIGFIHSGSP LPFVYDLADL YKEPLCIDLA FSLSREMAGH YDKYKVSDAF RKRVIAIDLL NQITADVNEL MGVKHARRTR K
|
| |