| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0883 |
|---|
| Symbol | |
|---|
| ID | 8117698 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 1024140 |
|---|
| End bp | 1024907 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644851275 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003003241 |
|---|
| Protein GI | 251788520 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0388] Predicted amidohydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAACTT TAAAGGTCAC CCTGTTACAA CAACCGTTGG TGTGGATGGA TGGTCCTGCC
AACCTGAGCC ATTTTGACGG CCTGTTAAGC GAGATTACCG ACCGCGACCT GATCGTGCTG
CCGGAAATGT TCACCACCGG TTTTGCCATG GAAGCGGCCA AAAGCAGCCT GGAACAGCCG
GTGGTAGAAG CCTGGCTGAA ACAGTGGGCG CAGCGCAACA ATGCGCTGGT AGGCGGCAGC
GTGGCGGTGC AGAGCGACAA AGGGGCGGTT AACCGCTTTC TGCTGGCCGA CCCGCAGGGA
CGGCTGTACC AGTACGATAA GCGTCACCTG TTCCGCATGG CGGGCGAGCA TGAGTATTAC
CAGTCCGGCC AGACGCGGGA AATCGTGGAA TGGCGCGGCT GGCGGATTAT GCCGCTGATC
TGCTACGACT TGCGCTTTCC GGTATGGTCC CGCAATCGTC AGGATTACGA TCTGGCGCTG
TACGTCGCCA ACTGGCCGGC ACCGCGCGCG CAGCACTGGA AAACCCTGCT GGCGGCGCGG
GCGATTGAAA ATCAGGCGTA TGTGGCGGGC TGCAACCGCG TCGGCACCGA CGGCAACGGC
CACAGCTATC AGGGCGACAG CCTGATTATC GACGCACAAG GCGCAATTCT GGCCTCGGCC
CCTGAGCATC AGCCTGCACG CCTTGACGCC GAATTATCGC TGGAAGCGCT GCAAAGCTAC
CGTGAAGCCT TCCCCGCCTG GCGCGACGCC GATAAGTTCG GTTTGTAA
|
|---|
| Protein sequence | MSTLKVTLLQ QPLVWMDGPA NLSHFDGLLS EITDRDLIVL PEMFTTGFAM EAAKSSLEQP
VVEAWLKQWA QRNNALVGGS VAVQSDKGAV NRFLLADPQG RLYQYDKRHL FRMAGEHEYY
QSGQTREIVE WRGWRIMPLI CYDLRFPVWS RNRQDYDLAL YVANWPAPRA QHWKTLLAAR
AIENQAYVAG CNRVGTDGNG HSYQGDSLII DAQGAILASA PEHQPARLDA ELSLEALQSY
REAFPAWRDA DKFGL
|
|---|
| |