| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0841 |
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| Symbol | |
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| ID | 8120657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | + |
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| Start bp | 974695 |
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| End bp | 975687 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644851227 |
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| Product | RNA polymerase sigma factor RpoS |
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| Protein accession | YP_003003199 |
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| Protein GI | 251788478 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02394] RNA polymerase sigma factor RpoS
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.195933 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAAA ATACGCTGAA AGTTAACGAG TTACATGAAG ATGCTGAATT TGATGAGAAT
GGAGTCGACG TTTTTGACGA CAAAGCGCTG GCAGAGGAAG AAACCGGCGA TAGCGATCTA
CTCGATGAGG AATTGCTCTC GCAAGGAACT GCACAGCGTG TGCTGGATGC TACTCAGCTC
TATTTGGGAG AGATCGGCTA CTCACCTCTT CTGACGGCGG AAGAAGAAGT CTATTTTGCC
CGTCGGGCGC TACGCGGCGA TCTCTCCTCT CGCCGCCGTA TGATTGAGAG TAACCTGCGG
CTGGTGGTGA AGATCGCCCG CCGCTACAAC AATCGAGGAC TGGCGTTGCT GGACTTGATT
GAAGAAGGGA ACCTCGGCCT GATCCGTGCC GTTGAGAAAT TTGACCCTGA ACGTGGGTTC
CGTTTTTCAA CCTATGCCAC TTGGTGGATC CGTCAGACCA TTGAACGGGC CATCATGAAC
CAGACGCGTA CTATTCGTTT ACCTATCCAT ATCGTTAAAG AACTCAATGT CTATCTGCGT
ACTGCGCGTG AGCTTTCTCA CAAGCTTGAC CACGAGCCGA GTGCGGAAGA GATTGCCGAA
CGGTTGGATA AACCGGTGGA TGACGTAAAC CGTATGCTGC GTCTTAACGA GCGCATCACA
TCGGTAGATA CGCCGCTGGG AGGCGATTCG GAAAAAGCGT TGCTGGATAT TCTGGCCGAT
GAGAAGGATA ACGGCCCGGA AGACACCACT CAGGATAACG ATATGAAACA GAATATCGTT
AAGTGGTTGT TTGAACTGAA CGCTAAACAG CGCGAAGTAC TGGCACGCCG TTTCGGTCTG
TTGGGATATG AGGCGGCGAC GCTGGAAGAT GTCGGTCGTG AAATAGGTCT GACCCGCGAA
CGGGTTCGCC AGATTCAGGT AGAAGGTTTG CGTCGTCTGC GTGAAATTCT GCAGGTACAA
GGTCTGGATA TCGAAGAACT GTTCCGCGAG TAA
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| Protein sequence | MSQNTLKVNE LHEDAEFDEN GVDVFDDKAL AEEETGDSDL LDEELLSQGT AQRVLDATQL
YLGEIGYSPL LTAEEEVYFA RRALRGDLSS RRRMIESNLR LVVKIARRYN NRGLALLDLI
EEGNLGLIRA VEKFDPERGF RFSTYATWWI RQTIERAIMN QTRTIRLPIH IVKELNVYLR
TARELSHKLD HEPSAEEIAE RLDKPVDDVN RMLRLNERIT SVDTPLGGDS EKALLDILAD
EKDNGPEDTT QDNDMKQNIV KWLFELNAKQ REVLARRFGL LGYEAATLED VGREIGLTRE
RVRQIQVEGL RRLREILQVQ GLDIEELFRE
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