Gene Dd1591_0837 details

Gene Information

• Locus tag: Dd1591_0837
• Symbol: ispF
• ID: 8120653
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya zeae Ech1591
• Kingdom: Bacteria
• Replicon accession: NC_012912
• Strand: +
• Start bp: 970813
• End bp: 971310
• Gene Length: 498 bp
• Protein Length: 165 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 644851223
• Product: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• Protein accession: YP_003003195
• Protein GI: 251788474
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• TIGRFAM ID: [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.675171
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTATCG GTCACGGTTT TGATGTGCAT AAATTTGGCG GCGAAGGCCC GCTGGTGATC 
GGTGGGGTAC GTATTCCCTA TGAGCGCGGT TTACTGGCGC ATTCCGATGG TGATGTTGTG 
CTACATGCCG TCACTGACGC ACTGCTGGGC GCCGCGGCGA TGGGCGATAT CGGAAAACTG 
TTTCCCGACA CCGACCCGGC GTATCGCGGC ATCGACAGTC GCGAGCTTTT GCGTGAGGCC 
TGGCGTCGCA TCACCGATAA AGGCTACCAA CTGGGTAATC TCGATGTCAC TATCATTGCT 
CAGGCGCCCA AAATGGCGCC GCATATCCCG CAAATGCGCG TCAACATTGC CGAAGATCTG 
CAATCACATA TGGATGACGT CAATGTTAAA GCCACCACGA CGGAGCAGTT AGGTTTCACC 
GGGCGTGGCG AGGGGATTGC CTGTGAAGCG GTGGTGTTAC TGGTGCGGAG TGACGCCGCC 
GGAGTTGTGG CATGGTGA 

 

Protein sequence

MRIGHGFDVH KFGGEGPLVI GGVRIPYERG LLAHSDGDVV LHAVTDALLG AAAMGDIGKL 
FPDTDPAYRG IDSRELLREA WRRITDKGYQ LGNLDVTIIA QAPKMAPHIP QMRVNIAEDL 
QSHMDDVNVK ATTTEQLGFT GRGEGIACEA VVLLVRSDAA GVVAW