Gene Dd1591_0815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_0815 
SymbolrelA 
ID8120631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp942536 
End bp944773 
Gene Length2238 bp 
Protein Length745 aa 
Translation table11 
GC content57% 
IMG OID644851201 
ProductGDP/GTP pyrophosphokinase 
Protein accessionYP_003003173 
Protein GI251788452 
COG category[T] Signal transduction mechanisms
[K] Transcription 
COG ID[COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases 
TIGRFAM ID[TIGR00691] (p)ppGpp synthetase, RelA/SpoT family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000200525 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTGCGG TAAGAAGTGC GCATTTGAAT ACCGAAGGCA AGTTCGTGCC GGACGCGTGG 
ATTGCCTCCC TGGGTATCGC CAGTAAAACA TCGTGCGAAC GCCTCGCCGA CACCTGGCGC
TACTGCGAAG AAAAAACAGA AGGCCACCCG GATGCGATGC TGCTGTTGTG GCGCGGCATC
GAGATGGTGG AAATTCTCTC CACCCTGAGT ATGGATAACG ACAGTATGCG CGCGGCGATG
CTGTTCCCGT TGGCGGATGC CAATGTGGTG GAAGAGGATA CGCTGCGGGA AACCTTCGGC
AAGAATATCG TCAATCTGGT GCATGGCGTG CGCGATATGG ATGCGATTCG CCAGCTTAAA
GCCACCCAGC ACGATTCGAT GGCTTCCGAG CAGGTGGACA ATATCCGCCG TATGCTGCTG
GCGATGGTGG AAGACTTTCG CTGCGTAGTG ATCAAGCTCG CCGAGCGCAT CGCCCACCTG
CGTGAAGTGA AGGATGCGCC GGAAGAAGAA CGTGTACTGG CGGCCAAAGA GTGTACCAAT
ATCTATGCGC CGCTGGCGAA TCGGCTGGGC ATCGGCCAGC TCAAGTGGGA GCTGGAGGAT
TTCTGCTTCC GCTATCTGCA TCCGGATGAG TACAAACGCA TTGCCAAACT GCTGCACGAA
CGGCGTATCG ACCGTGAGCA GTACATCGAC GACTTCGTTA AAAACCTGCG CGCTTCGATG
CAAACGGAAG GGCTTAAGGC CGAGATCTAC GGCCGCCCCA AACATATCTA CAGCATCTGG
CGCAAGATGC AGAAAAAATC GCTGTCGTTC GATGAGTTGT TCGACGTGCG GGCGGTGCGC
ATCGTGGTAG AGCGTTTGCA GGATTGTTAC GCCGCGCTCG GTATCGTGCA TACCCATTAT
CGCCACCTGC CGGATGAATT CGACGACTAT GTCGCCAACC CTAAACCCAA CGGCTATCAG
TCGATCCACA CCGTGGTGCT GGGGCCGGGC GGCAAGACGC TGGAAATTCA GATTCGTACC
CGGCAGATGC ATGAAGATGC CGAGTTGGGC GTCGCCGCGC ACTGGAAATA CAAGGAAGGC
GCCGCCACCA GCGGGCGCTC CGGTTACGAA GGGCGTATTG CCTGGCTGCG TAAGTTGCTG
GCCTGGCAGG AAGAAATGGC CGACTCGGAC GAAATGCTCG ACGAGGTACG CAGCCAGGTA
TTCGACGACC GCGTTTACGT ATTTACCCCC AAAGGCGATG TGGTGGATTT GCCGACCGGC
TCCACGCCGT TGGATTTTGC CTACCATATT CACAGCGACA TCGGTCACCG TTGCATCGGC
GCCAAAGTGG GCGGGCGTAT CGTGCCCTTC ACTTATCAGT TGCAAATGGG CGACCAGATT
GAAGTCATCA CCCAGAAGCA GCCGAACCCA AGCCGCGACT GGTTGAATCC TAATCTGGGG
TATATCACCA CCAGCCGCGG GCGGTCCAAA ATCCATAACT GGTTCCGCAA GCAGGACAGA
GACAAGAATA TTCTGGCGGG TAAACAGATT CTGGATGATG AGCTGGCGCA TCTCGGCGTG
AGCCTGAAGA TGGCGGAAAA ACTGCTGTTG CCGCGTTACA ACATCAATTC GATGGATGAA
TTGCTGGCGG GCATCGGCGG CGGCGATATC CGCCTCAATC AGTTGGTGAA TTTCCTGCAG
TCGAAGGTGA ATCAGCCGAG TGCGGAAGAG CAGGATCGCG AAGCGCTGCG CCAGTTGACG
CAGAAATCTC AGCAGCCGGC TCAGCGCGTC AGCGCTAAAG ACAACGGCCG GGTAGTGGTG
GAAGGGGTCG GCAACCTGAT GCATCACATC GCGCGCTGCT GCCAGCCGAT TCCGGGTGAC
GATATTATCG GCTTCATCAC CCGCGGACGC GGTATTTCCA TCCACCGTGC CGACTGCGAA
CAGCTCGACG ACCTGCGCAG TCACGCGCCG GAGCGCATTG TCGAAGCGGT ATGGGGCGAA
AGCTACTCCA GCGGCTATTC GCTGGTAGTC AGGGTGACCG CCAACGATCG TAGCGGCCTG
CTGCGTGATA TCACCACCAT TCTGGCTAAC GAAAAGGTCA ATGTGTTGGG GGTTTCAAGC
CGCAGCGACG TAAAACAGCA GCTCGCCACC ATCGACATGG ACATCGAGAT CTACAACCTG
CAGGTGCTGG GCCGGGTGCT GGCCAAGCTG AATCAACTGC CGGATGTGAT TGACGCCCGG
CGGTTGCAGG GCAATTGA
 
Protein sequence
MVAVRSAHLN TEGKFVPDAW IASLGIASKT SCERLADTWR YCEEKTEGHP DAMLLLWRGI 
EMVEILSTLS MDNDSMRAAM LFPLADANVV EEDTLRETFG KNIVNLVHGV RDMDAIRQLK
ATQHDSMASE QVDNIRRMLL AMVEDFRCVV IKLAERIAHL REVKDAPEEE RVLAAKECTN
IYAPLANRLG IGQLKWELED FCFRYLHPDE YKRIAKLLHE RRIDREQYID DFVKNLRASM
QTEGLKAEIY GRPKHIYSIW RKMQKKSLSF DELFDVRAVR IVVERLQDCY AALGIVHTHY
RHLPDEFDDY VANPKPNGYQ SIHTVVLGPG GKTLEIQIRT RQMHEDAELG VAAHWKYKEG
AATSGRSGYE GRIAWLRKLL AWQEEMADSD EMLDEVRSQV FDDRVYVFTP KGDVVDLPTG
STPLDFAYHI HSDIGHRCIG AKVGGRIVPF TYQLQMGDQI EVITQKQPNP SRDWLNPNLG
YITTSRGRSK IHNWFRKQDR DKNILAGKQI LDDELAHLGV SLKMAEKLLL PRYNINSMDE
LLAGIGGGDI RLNQLVNFLQ SKVNQPSAEE QDREALRQLT QKSQQPAQRV SAKDNGRVVV
EGVGNLMHHI ARCCQPIPGD DIIGFITRGR GISIHRADCE QLDDLRSHAP ERIVEAVWGE
SYSSGYSLVV RVTANDRSGL LRDITTILAN EKVNVLGVSS RSDVKQQLAT IDMDIEIYNL
QVLGRVLAKL NQLPDVIDAR RLQGN