| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0808 |
|---|
| Symbol | |
|---|
| ID | 8120624 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 932429 |
|---|
| End bp | 933814 |
|---|
| Gene Length | 1386 bp |
|---|
| Protein Length | 461 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644851194 |
|---|
| Product | Glucarate dehydratase |
|---|
| Protein accession | YP_003003166 |
|---|
| Protein GI | 251788445 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
|---|
| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
|---|
| TIGRFAM ID | [TIGR03247] glucarate dehydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGCAGG GTAAGGACGA GAACATGAGC AGTACGCAAG ATACTCCCGT CATTACCGAC
ATGAAAGTCA TCCCTGTCGC AGGTTATGAC AGCATGTTGC TCAATATTGG TGGTGCACAC
GGGGCGTATT TCACCCGCAA CATCGTGATT CTGAAAGACA ACGCCGGTCA CACCGGCGTT
GGTGAGGCAC CGGGCGGCGA GGTGATCTAC AACACGCTGA CGGCGATGAC GTCACAGGTG
GTCGGGTCTC AGGTAGCGCG CATGAACCAC CTGGTACATC AGGTACACAA AGGCAACCAG
TCTTCGGATT TCGATTCGTT CGGCAAAGGT GCCTGGACGT TCGAATTGCG GGTCAACGCT
GTCGCCGCAC TGGAAGCCGC CCTGCTGGAC CTGCTGGGGC AGCACCTGAA TGTGCCGGTG
GCTGAATTGC TGGGGCCGGG CAAACAGCGC GACGAAGTCA CTGTGCTCGG TTACCTGTTC
TATATCGGCG ATCGCACCAA AACAGATCTG CCCTATCTGG AAGGTGAGCA GGGTAAACAC
CCGTGGTATC ACCTGCGCCA TCAGCAGGCG ATGGACAGCG AGGCCGTGGT GCGGCTGGCG
GAAGCGGCGG CCGATCGTTA CGGTTTCAAA GACTTCAAAC TGAAAGGCGG CGTGTTGCCG
GGCGAGCTGG AAATCGACGC CGTGAAAGCG TTGAAAAAGC GCTTCCCGGA TGCCCGCATC
ACGGTAGACC CGAACGGCGC CTGGTTGCTC GACGAAGCGA TTAGCTTGTG TAAAGGCCTG
AACGACGTAC TGACTTACGC AGAAGATCCG TGCGGCGCCG AGCAGGGTTT CTCCGGCCGT
GAGGTGATGG CGGAGTTTCG TCGTGCCACC GGCTTGCCGG TCGCCACCAA CATGATTGCC
ACCAACTGGC GTGAAATGAA CCACGCCGTG ATGTTGCAGG CGGTGGATAT TCCGTTGGCG
GATCCGCATT TCTGGACCAT GCACGGCGCG GTGCGGGTGG CGCAACTGTG CGATGAGTGG
GGGCTGACCT GGGGTTGTCA CTCCAACAAC CACTTCGATA TTTCGCTGGC GATGTTCACC
CATGTGGGCG CCGCGGTTCC GGGCAAACCG ACCGCTATCG ACACCCACTG GATCTGGCAG
GAAGGCCAGC ACCTGACCAA AGAGCCGCTG CAAATCGTTA ACGGCAAAAT CAAGGTGCCG
GAGAGACCGG GGCTGGGGAT TGAACTGGAC ATGGAGCAGG TGATGAAAGC CCATGACCTG
CACAAGAAAC TGCCGAGCGG CGCGCGCAAT GACGCAGCGG CGATGCAGTA CCTGATCCCC
GGCTGGCAAT TTGATCGCAA ACGCCCGGTA TTCGGACGCG AGTTACCTAA GAATTCAACG
TTTTAA
|
|---|
| Protein sequence | MMQGKDENMS STQDTPVITD MKVIPVAGYD SMLLNIGGAH GAYFTRNIVI LKDNAGHTGV
GEAPGGEVIY NTLTAMTSQV VGSQVARMNH LVHQVHKGNQ SSDFDSFGKG AWTFELRVNA
VAALEAALLD LLGQHLNVPV AELLGPGKQR DEVTVLGYLF YIGDRTKTDL PYLEGEQGKH
PWYHLRHQQA MDSEAVVRLA EAAADRYGFK DFKLKGGVLP GELEIDAVKA LKKRFPDARI
TVDPNGAWLL DEAISLCKGL NDVLTYAEDP CGAEQGFSGR EVMAEFRRAT GLPVATNMIA
TNWREMNHAV MLQAVDIPLA DPHFWTMHGA VRVAQLCDEW GLTWGCHSNN HFDISLAMFT
HVGAAVPGKP TAIDTHWIWQ EGQHLTKEPL QIVNGKIKVP ERPGLGIELD MEQVMKAHDL
HKKLPSGARN DAAAMQYLIP GWQFDRKRPV FGRELPKNST F
|
|---|
| |