| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0737 |
|---|
| Symbol | |
|---|
| ID | 8119460 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 848699 |
|---|
| End bp | 850135 |
|---|
| Gene Length | 1437 bp |
|---|
| Protein Length | 478 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644851124 |
|---|
| Product | glycoside hydrolase family 1 |
|---|
| Protein accession | YP_003003096 |
|---|
| Protein GI | 251788375 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2723] Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.484053 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAGG TATCAATGAC CCTTCCTGAG GGATTTATTC TGGGGGCGGC ATCATCCGCC
TGGCAGACCG AGGGGTGGTC GGGCAAGAAA AGCGGGCAGG ATTCCTATCT GGACCTGTGG
TACAAACGCG ATCGTCAGGT GTGGCACAAC GGCTATGGCC CGGCGGTCGC CACCGATTTC
TACAACCGCT ACCGTGAAGA CGTGGCGTTG ATGAAGCAGA CCGGGCTGAC GCACTTTCGT
ACCTCCATCA ACTGGTCGCG CTTCATGCTG GACTATGAAA ACGGCGTGGT GGATGAAGAG
TACGCCGCTT ACATCGACAA TCTGATCGAC GAACTGCACC GGCAAGGCAT CGAACCGATG
CTGTGTCTGG AACACTATGA ATTGCCGGCG GTGCTGTTCG AGAAGTATCA GGGTTGGTCG
TCGAAGCAGG TGGTGGAGTG GTTCGTGCAG TATGCCGACG CGGTGTTCGC CCGCTATGCC
GGCAAAGTCA AACGCTGGTT CACCTTTAAC GAGCCGATTG TGGTGCAGAC CCGCGTCTAT
CTGGACGCGG TGCGCTACCC TTACCAGCAG GACAGCGGCG TCTGGATGCA GTGGAACCAC
CACAAGAATC TGGCGACCGC CAAAGTGGTG CAACTGTTCC GCGATAAAGG TTACCACCGC
GACGGCGGCA GCATCGGGGT GATCCTCAAC CCGGAAGTCA CCTATCCGCG TTCCAGCGCG
GCACACGATG TGGAGGCGGC GCGCCTGTAT GACCTGTTCT ACAACCGGGT CTTTCTCGAC
CCGGCGCTGA AAGGCGAGTA CCCGGCGGAG CTGCTGGCGC TGCTGGAAAA GCACCAGGTG
CATTGGGATT ACACCGAGGA GGAGCTGGCG ATTATCCGCG CCAATACCGT GGACGAGGTG
GGGATCAATC TCTATTACCC GCACCGGGTC AAAGCGCCCA GCCGGGCGTG GAACAGCAAT
ACGCCGTTCC ACCCGGCTTA CTATTACGAG CATTTCGAGC TGCCTGGCCG CCGGATGAAC
AAGTCGCGCG GTTGGGAAAT CAACCCCCGC ATTATTTACG ACATGGCGAT GCGCCTGAAG
GATGAGTACG GCAACGTGCC CTGGTTCGTG TCGGAAAACG GCATGGGGAT TGAAAACGAA
GGCCAGTTCA AAGACAGCCG CGGCGTGATA CAGGATGACT ACCGCATCGC GTTTATCGCC
GAGCACCTTT ACTGGACGCT GAAGGCGCGT GAAGACGGGG CCAACTGTCT GGGTTACATG
CTGTGGGCGT TTACCGACAA CGTCTCGCCG ATGAACGCGT TCAAAAACCG TTACGGCCTG
ATTGAAATCG ATCTGGAACA CGACCGGCAG CGTAGAGCGA AGAAATCGGC CGGCTGGTTC
AGTCAGGTAC GGGACGGCGG CGTGCTGTCG TTCGAACTGG ACGATGAAGA TAAATAG
|
|---|
| Protein sequence | MSKVSMTLPE GFILGAASSA WQTEGWSGKK SGQDSYLDLW YKRDRQVWHN GYGPAVATDF
YNRYREDVAL MKQTGLTHFR TSINWSRFML DYENGVVDEE YAAYIDNLID ELHRQGIEPM
LCLEHYELPA VLFEKYQGWS SKQVVEWFVQ YADAVFARYA GKVKRWFTFN EPIVVQTRVY
LDAVRYPYQQ DSGVWMQWNH HKNLATAKVV QLFRDKGYHR DGGSIGVILN PEVTYPRSSA
AHDVEAARLY DLFYNRVFLD PALKGEYPAE LLALLEKHQV HWDYTEEELA IIRANTVDEV
GINLYYPHRV KAPSRAWNSN TPFHPAYYYE HFELPGRRMN KSRGWEINPR IIYDMAMRLK
DEYGNVPWFV SENGMGIENE GQFKDSRGVI QDDYRIAFIA EHLYWTLKAR EDGANCLGYM
LWAFTDNVSP MNAFKNRYGL IEIDLEHDRQ RRAKKSAGWF SQVRDGGVLS FELDDEDK
|
|---|
| |