| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0584 |
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| Symbol | tbpA |
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| ID | 8119867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 665383 |
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| End bp | 666366 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644850973 |
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| Product | thiamine transporter substrate binding subunit |
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| Protein accession | YP_003002945 |
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| Protein GI | 251788224 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4143] ABC-type thiamine transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01254] ABC transporter periplasmic binding protein, thiB subfamily
[TIGR01276] thiamine ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.711695 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTAAAGA AATTACTGTC CTGCCTGTTA CTGCTGTCCG CCCCTGTATT CGCCAAACCG
ACTCTGACGG TCTATACCTA CGACTCGTTC GCCTCAGAGT GGGGCCCCGG CCCGGCTGTC
CAAACCGCCT TTGAAAAAGA GTGCGACTGT GAACTGAAAT TCGTGGCGCT GGAAGATGGC
GTCGCCCTGC TCAACCGCCT GCGTATGGAA GGCAAAAACA CCCCGGCGGA CGTAGTTCTG
GGGCTGGATA ATAATCTGGT GCAGGCGGCG GCGCAGACCG GCCTGTTCGC CCCACATGCC
GTCAATACCA GCACGCTGAC CGTCCCCGGC GGCTGGCGCA ACGAGACTTT CCTGCCCTTC
GATTACGGCT ATTTCGCCTT CGTCTATAAC AAAGACAAGC TGAAAAACCC GCCGAAAAGC
CTGCATGAGC TAGTGGAAAG CGACCAGCGG TGGACCGTTA TCTATGAAGA TCCGCGCACC
AGCACGCCGG GTCTGGGGCT GCTGCTGTGG ATGCAGAAAG TCTACGGCGA AAAAGCGCCG
CAGGCCTGGC AGAAACTGGC GGCCAAAACC GTCACCGTCA CCAAAGGCTG GAGCGAAGCC
TACGGCTTGT TCCTGAAAGG CGAAGCCGAT CTGGTACTGA GCTACACCAC CTCACCGGCT
TACCACCTCA TCGCCGAGAA GAAAGACAAC TATGCCGCGG CTAATTTCAG CGAAGGCCAC
TACCTGCAGG TGGAAGTCGC CGCACAACTG GCCGGCAGTA AAAATCCGCA ACTGGCGGCA
CGCTTTCTGC AATTTATGGT AAGCCCGGCC TTCCAGCAGA TCATCCCAAC CACCAACTGG
ATGTACCCGG TAATCAAAAC CGAGCTGCCG GTGGGCTATA ACACCTTGTC TCTGCCGGCT
ACCGCGCTGG AATTTACCCC GCAGCAGGTG GCGGAACAGC GGGCGAATTG GGTTCAAGCA
TGGCAACGCG CCGTCAGCCG CTAA
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| Protein sequence | MLKKLLSCLL LLSAPVFAKP TLTVYTYDSF ASEWGPGPAV QTAFEKECDC ELKFVALEDG
VALLNRLRME GKNTPADVVL GLDNNLVQAA AQTGLFAPHA VNTSTLTVPG GWRNETFLPF
DYGYFAFVYN KDKLKNPPKS LHELVESDQR WTVIYEDPRT STPGLGLLLW MQKVYGEKAP
QAWQKLAAKT VTVTKGWSEA YGLFLKGEAD LVLSYTTSPA YHLIAEKKDN YAAANFSEGH
YLQVEVAAQL AGSKNPQLAA RFLQFMVSPA FQQIIPTTNW MYPVIKTELP VGYNTLSLPA
TALEFTPQQV AEQRANWVQA WQRAVSR
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