| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0568 |
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| Symbol | |
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| ID | 8119851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 648463 |
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| End bp | 649116 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644850957 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_003002929 |
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| Protein GI | 251788208 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.494043 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACCCT ATAACCCGCC CCGCGATCCC TGGCAGCACA TCCTGTACCA GGATCAGCAC
ATCATGGTGG TGAACAAACC CAGCGGATTG CTCTCCGTTC CCGGCCGTGC CGAAGAACAT
AAAGACAGCA TCATGACCCG CATTCAGGCC GACTTTCCCG CGGCCGAATC CGTCCATCGT
CTGGACATGG CCACCAGCGG CGTAATGGTG GTGGCGCTGA CCAAGGCGGC TGAACGGGAA
TTGAAACGCC AGTTTCGTGA ACGGGAACCG AAGAAATCCT ATATCGCACG CGTCTGGGGG
CACCTGACGC AGGATGACGG GCTGGTCGAT CTGCCGCTGA TTTGCGACTG GCCGAACCGC
CCAAAACAAA AAGTTTGTTT TGAACAGGGC AAACCCGCCC AAACCAACTA TACCGTGTTA
TCACGAGACA ACGACGGTAC CACCCGCGTG AAGCTGATGC CGATCACCGG GCGTTCACAC
CAGTTGCGCG TCCACATGTT GGCGCTCGGC CATCCGATTC TGGGCGACGG ATTTTACGCC
CACCCAGAAG CTAAAGCGCT GGCTCCCCGT TTATTACTTC ATGCACAGGA ACTGGCGATC
ACCCATCCGG TCTTTAACAC ACCGATGCAT TTTCGCTGCG AAGCAGATTT CTAA
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| Protein sequence | MEPYNPPRDP WQHILYQDQH IMVVNKPSGL LSVPGRAEEH KDSIMTRIQA DFPAAESVHR
LDMATSGVMV VALTKAAERE LKRQFREREP KKSYIARVWG HLTQDDGLVD LPLICDWPNR
PKQKVCFEQG KPAQTNYTVL SRDNDGTTRV KLMPITGRSH QLRVHMLALG HPILGDGFYA
HPEAKALAPR LLLHAQELAI THPVFNTPMH FRCEADF
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