Gene Dd1591_0544 details

Gene Information

• Locus tag: Dd1591_0544
• Symbol: nhaA
• ID: 8119827
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya zeae Ech1591
• Kingdom: Bacteria
• Replicon accession: NC_012912
• Strand: +
• Start bp: 620009
• End bp: 621214
• Gene Length: 1206 bp
• Protein Length: 401 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 644850933
• Product: pH-dependent sodium/proton antiporter
• Protein accession: YP_003002905
• Protein GI: 251788184
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG3004] Na+/H+ antiporter
• TIGRFAM ID: [TIGR00773] Na+/H+ antiporter NhaA

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCTGCCG ATGCAGTAAG GGAGAAAAAC GTGATAAAGC TATTCCGCTA TTTGACCGGC 
CAGGAAGCGG CTGCCGGTAT GATTCTGATT ATTGCAACGC TGCTGGCGCT GCTGGTCGCC 
AATATACCGG CCACCTTGTC GTGGTATCAG TCATTTTTAG CGATGCCGGT GATAATGGGA 
ATTGGCGCGC TGGAGATTAA CAAACCGCTG CTGCTGTGGG TCAATGATGG CTTGATGGCG 
TTGTTTTTCC TGCAAGTGGG CCTAGAAGTG AAACGCGAAC TGGTGATCGG CGCGCTGGCG 
AGCCGGCGTC AGGCGATTCT GCCGGTGGTA GCGGCGTTCG GCGGGATGCT GGTTCCCGCG 
CTGTTTTTCC TGTTGTTCAA TGCCACTGAA GCGGAAACCC GCTCGGGCTG GGCGATCCCT 
ACGGCGACGG ATATTGCTTT TGCGGTCGGT ATTTTGGTGC TGTTGGGCAA ACGAGTGCCG 
ACAGGATTAA AGGTGTTTCT GCTGGCGCTG GCGATTATTG ATGACCTGGG CGCGATCGTC 
ATTATTGCCT TGTTCTATAC TCAGCAACTT CACTGGATGG CGCTATCCGG AGCGCTGGCG 
GCGATCGTGG TGCTGGCGTA CATGAATCAT CAGCAGGTGA TGAAAACCTC GGCTTATCTG 
TTAGTCGGCA TAGTGTTGTG GGTGTGTATT TTGAAATCAG GTGTGCACGC CACACTGGCC 
GGAGTCATCG TCGGATTTTT TATTCCGTTG CGTGTTCCGT CAGGCCATCC CTCGCCTGCC 
GGTACGCTGG AGCACGGGCT GGCGAGTTGG GTCGCGTTTC TGGTGATCCC GCTGTTTGCC 
TTCGCCAATG CCGGTATTAC GCTGCAGGGG GTTGCTGCTG AGCACTTGTT GTCGCCATTG 
ACGTTGGGCA TCGCCAGCGG GTTGCTGCTG GGCAAACCGA TTGGCGTCTC GTTGTTTAGC 
TGGCTGGTGA TTCGTCTGGG GCTGGGTCGG CTGCCGGCAG GCGTGGATTT TCGTCAGGTC 
ATGGCGGTAT CGGTGCTGTG CGGTATTGGG TTCACCATGT CCATCTTCAT TACGTTGCTG 
GCGTTTGGTG AGGTGGCCGA GCAGGATATT CTGTACGCCA AATTAGCGAT TTTGCTGACG 
TCGCTGACCA CGGCGGTGTT GGGTTACCTG ACGTTGCGCT CGGTGCTGCC TGCCGCACAA 
CGCTGA 

 

Protein sequence

MPADAVREKN VIKLFRYLTG QEAAAGMILI IATLLALLVA NIPATLSWYQ SFLAMPVIMG 
IGALEINKPL LLWVNDGLMA LFFLQVGLEV KRELVIGALA SRRQAILPVV AAFGGMLVPA 
LFFLLFNATE AETRSGWAIP TATDIAFAVG ILVLLGKRVP TGLKVFLLAL AIIDDLGAIV 
IIALFYTQQL HWMALSGALA AIVVLAYMNH QQVMKTSAYL LVGIVLWVCI LKSGVHATLA 
GVIVGFFIPL RVPSGHPSPA GTLEHGLASW VAFLVIPLFA FANAGITLQG VAAEHLLSPL 
TLGIASGLLL GKPIGVSLFS WLVIRLGLGR LPAGVDFRQV MAVSVLCGIG FTMSIFITLL 
AFGEVAEQDI LYAKLAILLT SLTTAVLGYL TLRSVLPAAQ R