Gene Dd1591_0519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_0519 
Symbol 
ID8120255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand+ 
Start bp588732 
End bp589394 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content56% 
IMG OID644850908 
Productribose 5-phosphate isomerase 
Protein accessionYP_003002880 
Protein GI251788159 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0120] Ribose 5-phosphate isomerase 
TIGRFAM ID[TIGR00021] ribose 5-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACAGG ATGAACTGAA AAAAGCCGTT GGCTGGGCTG CACTCGATTA TGTTCGCCCC 
GGTACTATTG TTGGCGTGGG GACGGGTTCT ACCGCCGCGC ATTTTATCGA CGCATTGGGG 
TCGATCAAAC ATCAGATTGA AGGCGCCGTC TCGAGCTCGG ACGCCTCGAC CGCCAAACTC 
AAAAGTCTGG GGATCCCGGT TTTTGATTGT AATGACGTAG ATGCGCTTGA CGTTTATGTC 
GATGGCGCGG ATGAAATCAA CCCACACATG CAGATGATCA AAGGCGGCGG TGCGGCGTTG 
ACGCGGGAGA AAATCATCGC GGCGATCGCT CGTCAGTTTG TGTGTATCGT TGATGCATCC 
AAACAGGTGG ATGTGCTGGG GCGTTTCCCG TTGCCCGTTG AGGTGATCCC GATGGCGCGG 
GCGTATGTTG CCCGGGAACT GGTCAAACTG GGTGGGCAAC CGGTGTATCG CGACGGTGTC 
GTCACCGATA ACGGCAACAT TATTTTGGAT GTACACAACA TGGATCTGTC CGATGCCGTG 
GCGATGGAGA GCCGTATCAA TGGTCTGGCT GGCGTGGTAA CCGTGGGGTT GTTCGCTAAC 
CGCGGGGCGG ATGTCGCGCT GGTGGGAACC GCCGATGGAG TGAAAATAGT CCGTCTAAAA 
TAA
 
Protein sequence
MTQDELKKAV GWAALDYVRP GTIVGVGTGS TAAHFIDALG SIKHQIEGAV SSSDASTAKL 
KSLGIPVFDC NDVDALDVYV DGADEINPHM QMIKGGGAAL TREKIIAAIA RQFVCIVDAS 
KQVDVLGRFP LPVEVIPMAR AYVARELVKL GGQPVYRDGV VTDNGNIILD VHNMDLSDAV 
AMESRINGLA GVVTVGLFAN RGADVALVGT ADGVKIVRLK