Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_0508 |
Symbol | |
ID | 8120244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | + |
Start bp | 573782 |
End bp | 575758 |
Gene Length | 1977 bp |
Protein Length | 658 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644850897 |
Product | arginine decarboxylase |
Protein accession | YP_003002869 |
Protein GI | 251788148 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1166] Arginine decarboxylase (spermidine biosynthesis) |
TIGRFAM ID | [TIGR01273] arginine decarboxylase, biosynthetic |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.595355 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGACG ATATGATTCA ACCGTACTCG TCAGCGACGG GTAAACACGA TCATCTGCGC TCCATGCAGG AGGTAGCCAT GAATGACCGC GACGCCAGCG AGATGCTGAG AACCTATAAC ATTGCCTGGT GGGGTAATAA TTATTACGAC GTCAATGAGT TAGGACATAT CAGCGTGTGT CCGGACCCTG ACGTGCCGGA AGCCCGCGTC GACCTGGCCA AACTAGTGAA AACCCGTCAG CAGGATAATC AGCGCCTGCC TGCGCTGTTT TGCTTCCCAC AGATTTTGCA GCACCGTTTG CGCTCCATCA ATGCGGCGTT CAAACGCGCG CGCGAGTCCT TCGGCTATGA AGGCGGTTAT TTCCTGGTTT ATCCCATCAA AGTTAACCAA CATCGCCGTG TCATTGAGTC GCTGATCAAT TCCGGCGAGC CGCTGGGGTT GGAAGCCGGT TCCAAAGCCG AGCTGATGGC GGTACTCGGC CATGCGGGCA TGACCCGCAC CGTGATCGTC TGTAACGGCT ATAAAGACCG CGAGTATATT CGCCTGGCGC TGATCGGTGA AAAACTGGGT CACAAGGTGT ATCTGGTCAT CGAAAAGATG TCGGAAATCA AGCTGGTGTT GGAAGAAGCC GAACGCCTGA ACGTGGTGCC GCGCTTGGGC GTACGTGCGC GTCTGGCGTC GCAGGGTTCC GGCAAATGGC AGTCCAGCGG CGGCGAGAAA TCCAAGTTTG GCCTGGCGGC GACGCAGGTA CTGCAACTGG TGGAACTGCT ACGCAATGCC AACCGTCTCG ATAGCCTGCA ACTGCTGCAT TTCCATCTGG GATCGCAGTT GGCGAATATC CGCGATATCG CGACCGGCGT ACGTGAATCG GCACGTTTTT ACGTCGAACT GCACAAACTG GGCGTGAATA TCCAGTGTTT TGACGTAGGT GGTGGGCTCG GCGTGGATTA TGAGGGAACG CGTTCCCAGT CCGACTGTTC GGTCAACTAT GGCCTGAACG AATACGCCAA CAACGTCATC TGGGGTATCG GCGACGCCTG TAATGAGTAT GGTTTGCCGC ATCCGATGGT GATCACCGAA TCCGGGCGTG CGGTGACGGC GCATCACACC GTACTGGTGT CCAATATTAT CGGGGTGGAG CGCAACGAGT TCAGCGAGCC GGTGGCGCCG GATGAAGACG CGCCGCGTGC GCTGGAAAGC TTATGGAGCA CCTGGCAGGA AATCCAGGAG CCGGGCAACC GTCGTTCGCT GCGTGAATGG TTGCACGACA GCCAGATGGA CCTGAACGAC GTCCACACGC AATATACCCA CGGCATGTTG GATTTGACCC AGCGCGCGCA AGCGGAACAA CTCTACCTGA ATATCTGCCA GCGTCTTCAG CAGCAGCTTG ACCCGAGTAA CCGCGCCCAT CGGCCGATTA TCGATGAATT GCAGGAACGC ATGGCGGATA AGTTGTACGT CAACTTCTCG CTGTTCCAGT CGATGCCGGA TGCCTGGGGG ATCGATCAGT TGTTCCCGGT GTTGCCGCTG GAAGGGTTGG ATAAGCCGCC GCAGCGCCGT GCGGTACTGC TGGATATCAC CTGTGATTCC GACGGCACCA TCGATCACTA CGTGGATGGC GATGGTGTGG CCACGACGAT GCCGATGCCG CCGTACGACC CGGAAAACCC GCCGTTGCTC GGGTTCTTCA TGGTGGGTGC GTATCAGGAA ATTCTCGGCA ATATGCACAA CCTGTTCGGC GACACGTCCA CCGTGGATGT GTTTGTATTC CAGGATGGGA CGGTTGAGCT GGAAGAGTCG GATGAAGGCA ACACGGTGGC CGATATGCTC GAATATGTGC AACTTGACCC GAATGTGCTG ATGTCCCGTT TCCGCGATCA GGTAAAAGAA ACCGACCTCG CGCCTGAACT GCAAGCGCAA TTCCTTGAAG AATTTGAAAC CGGCTTATAC GGTTATACTT ATCTGGAAGA CGAATAA
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Protein sequence | MSDDMIQPYS SATGKHDHLR SMQEVAMNDR DASEMLRTYN IAWWGNNYYD VNELGHISVC PDPDVPEARV DLAKLVKTRQ QDNQRLPALF CFPQILQHRL RSINAAFKRA RESFGYEGGY FLVYPIKVNQ HRRVIESLIN SGEPLGLEAG SKAELMAVLG HAGMTRTVIV CNGYKDREYI RLALIGEKLG HKVYLVIEKM SEIKLVLEEA ERLNVVPRLG VRARLASQGS GKWQSSGGEK SKFGLAATQV LQLVELLRNA NRLDSLQLLH FHLGSQLANI RDIATGVRES ARFYVELHKL GVNIQCFDVG GGLGVDYEGT RSQSDCSVNY GLNEYANNVI WGIGDACNEY GLPHPMVITE SGRAVTAHHT VLVSNIIGVE RNEFSEPVAP DEDAPRALES LWSTWQEIQE PGNRRSLREW LHDSQMDLND VHTQYTHGML DLTQRAQAEQ LYLNICQRLQ QQLDPSNRAH RPIIDELQER MADKLYVNFS LFQSMPDAWG IDQLFPVLPL EGLDKPPQRR AVLLDITCDS DGTIDHYVDG DGVATTMPMP PYDPENPPLL GFFMVGAYQE ILGNMHNLFG DTSTVDVFVF QDGTVELEES DEGNTVADML EYVQLDPNVL MSRFRDQVKE TDLAPELQAQ FLEEFETGLY GYTYLEDE
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