| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0369 |
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| Symbol | metH |
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| ID | 8116936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | + |
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| Start bp | 412774 |
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| End bp | 416460 |
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| Gene Length | 3687 bp |
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| Protein Length | 1228 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644850763 |
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| Product | B12-dependent methionine synthase |
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| Protein accession | YP_003002738 |
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| Protein GI | 251788017 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.789152 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGCAA ATCGGCTACA GGCATTACAA CAGCAACTGG CGCAGCGCAT TATGGTCCTG
GACGGCGGCA TGGGCACCAT GATCCAGAGT TACCGTTTGC AGGAAGAGGA TTACCGCGGC
GAGCGCTTTG CCGACTGGCA CTGCGACCTG AAAGGCAATA ACGACCTGCT GGTGCTGAGT
AAGCCGGAAG TCATCACCGC CATTCATCAC GATTATCTGG CGGCGGGCGC GGATATTCTG
GAAACCAACA CCTTCAACGC CACCCGCATC GCGATGGCCG ACTACGAGAT GGAAGCGCTG
TCGGCGGAAA TCAATACCGT CGCCGCCCGG CTGGCGCGTG CCTGCGCCGA TGAGTGGACG
GCACGTACGC CGGAGCGCCC GCGCTATGTC GCCGGGGTGT TGGGGCCGAC TAACCGCACC
GCGTCTATCT CACCGGACGT GAATGACCCG GCCTACCGTA ATGTCAGTTT CGACCAACTG
GTGGATGCCT ACCGTGAATC GACCCGCGCG TTGGTTGAGG GCGGCGTTGA CATCATCCTG
ATCGAAACCA TTTTCGACAC CCTGAACGCC AAAGCCGCCA TTTTTGCGGT AGAAACCGAA
TTCGAGGCGC TGGGCGTCAC GCTGCCGGTG ATGCTCTCCG GTACTATTAC CGACGCTTCC
GGCCGCACCC TGTCCGGGCA GACCACCGAA GCGTTTTACA ATTCGCTGCG CCATGCCCGG
CCGCTGTCGT TCGGCCTGAA CTGTGCACTG GGGCCGGATG AGTTGCGCCA GTATGTGGCG
GAACTGTCGC GCATTGCCGA ATGCTATGTC ACCGCTCACC CCAACGCCGG CTTGCCGAAT
GCTTTCGGCG AATACGATCT GGATGCGGAC GAAATGGCGC GTCAGATCGG CGAATGGGCG
CAATCCGGTT TCCTGAATAT TATCGGCGGG TGTTGCGGCA CCACGCCTGA ACACATCGCC
GCGATGGTCA ACGCCGTTGA GGGTGTCGCG CCGCGTGCCC TGCCGACGTT GCCGGTAGCT
TGCCGCTTGG CCGGGCTGGA GCCGCTGAAC ATCGGTGACG ACACGCTATT CGTTAACGTC
GGCGAACGCA CCAACGTCAC CGGTTCCGCT AAATTCAAAC GCCTGATCAA AGAAGAAAAG
TACAACGAAG CGCTGGACGT GGCGCGCCAG CAGGTGGAAA GCGGCGCGCA AATCATCGAC
ATCAACATGG ATGAAGGGAT GCTTAACGCC GAAGCGGCGA TGGTGCGTTT CCTGAATCTT
ATCGCTGGCG AGCCGGATAT CGCCCGTGTG CCGATCATGA TCGACTCCTC CAAGTGGGAC
GTGGTGGAAG CCGGGCTGAA ATGCATTCAG GGCAAAGGCA TCGTCAACTC GATTTCGATG
AAAGAAGGCG TAGACGCCTT TGTGCATCAT GCCCGGCTGG TGCGGCGCTA CGGCGCCGCG
GTGGTGGTGA TGGCGTTTGA CGAAGTGGGG CAGGCGGATA CCCGCGCGCG CAAGATTGAG
ATTTGCCGCC GCGCCTACCA CATACTGACC GAAGAGGTCG GTTTTCCGCC GGAAGACATC
ATTTTCGACC CGAACATTTT TGCCGTCGCT ACCGGCATTG ATGAACACAA CAACTATGCG
GTGGACTTTA TCGAGGCCTG CGCCGACATC AAAGCCCAAC TGCCGCACGC GCTGATTTCC
GGCGGCGTGT CTAACGTGTC GTTCTCGTTT CGCGGCAACG AGCCGGTGCG CGAAGCGATT
CATGCCGTAT TCCTGTATTA CGCTATTCGC AACGGCATGG ACATGGGCAT CGTCAACGCC
GGCCAGTTGG CAATCTACGA CGATTTGCCC GCCGAACTGC GTGACGCGGT GGAAGACGTG
ATTCTCAACC GGCGTGACGA CGGCACCGAA CGGATGCTGG AGATTGCCGA GAAATACCGG
GGCAGTAAAT CCGACGACGA CAGCAACAAA GGTGCGGCGG AATGGCGCGG CTGGCCAGTG
AGAAAACGGC TGGAATACGC GCTGGTTAAA GGCATTACCG AATTTATCGA GCAGGATACC
GAAGAGGCGC GAGCGGAATC GGCGCGCCCC ATTGAGGTGA TCGAAGGGCC GTTGATGGAC
GGCATGAACG TGGTCGGCGA CCTGTTCGGC GCCGGTAAGA TGTTCCTGCC GCAGGTGGTG
AAGTCGGCGC GGGTGATGAA GCAGGCGGTG GCGTATCTGG AACCGTTCAT TCAGGCTAGC
AAAGACCAGG GCTCCAGCGC CGGCAAGATT CTGCTGGCGA CGGTGAAGGG CGACGTACAC
GACATCGGCA AGAACATCGT CGGCGTGGTG TTGCAGTGCA ACAACTACGA AATTATTGAT
TTGGGCGTGA TGGTGCCGAC CGACAAGATC CTCAAGACCG CCCGCGAAGA GAAGGTCGAT
ATCATCGGCC TGTCGGGGTT GATTACCCCG TCGCTGGATG AAATGGTCAA CGTCGCCAAA
GAGATGGAGC GCCAGGGCTT TACGTTGCCG CTGCTGATTG GCGGGGCCAC CACCTCGAAA
GCGCACACTG CGGTGAAGAT CGAGCAGAAT TACAGCGGCC CGACGGTATA CGTGCAGAAT
GCATCGCGCT CGGTGGGCGT GGTGTCGGCG CTGCTCTCGG ATACGCAACG CGACGACTTT
GTGGCGCGTA TCCGCAAAGA GTATGAAACG GTGCGCATCC AGCACGGCCG CAAAAAACCG
CGCACGCCGC CGGTGTCGTT GGGCGTGGCG CGCGATAACG CCATGCCGAT CGACTGGGAA
AGCTATACGC CGCCGGTGGC GCATCGTCTC GGCGTTCAGC CGGTTACCGC CAGTATTGAG
ACGCTGCGCA ATTATATCGA CTGGACGCCG TTCTTTATGA CCTGGTCGCT GGCGGGCAAA
TACCCCAACA TTCTGGAAGA CGAGGTGGTG GGCGAAGAGG CCAAACGGCT GTTTGCCGAT
GCCAACGCCA TGCTGGATAC CCTGTCGGCC AGCGGTACGC TGAATCCGCG CGGGGTGGTG
GGGCTGTTCC CGGCCAACCG GGTGGGGGAT GACGTCGAAA TCTATACCGA CGAGCGCCGC
ACCGAGGTGC TGACCGTCAG CCATCATCTG CGCCAGCAAA CCGAAAAGAC CGATTTTCCC
AACTACTGTC TGGCGGATGT GGTGGCGCCG AAAGCCAGCG GCAAGCCGGA TTACCTCGGT
GCGTTCGCGG TAACCGGCGG TCTGGAAGAA GATGCGCTGG CGGCGCAATG GGAAGCGCAG
CACGACGACT ACAACAAGAT CATGCTTAAA GCACTGGCGG ACCGGCTGGC GGAAGCGTTC
GCCGAGTACC TGCACGAGCG GGTGCGCAAG GTTTACTGGG GCTACGCGCC GAACGAGAAC
CTCGGCAACG ACGAGTTGAT CCGCGAGAAT TATCAGGGTA TTCGCCCGGC GCCGGGTTAC
CCGGCTTGTC CGGATCACAC CGAGAAAGCG GCCATCTGGC AACTGCTGGA TGTGGACAAC
ACCGTCGGCA TGAAACTCAC CGAGTCTTAC GCGATGTGGC CGGGTGCGTC GGTGTCCGGC
TGGTACTTCA GTCATCCGGA CAGCAAGTAT TTCGCCGTGG CGCAAATCCA GCGCGATCAG
GTGGAAGACT ACGCGGTTCG CAAGCAGATG CCGGTAGAGG AGATAGAGCG CTGGCTGGCG
CCGAATCTGG GATATGATGC AGACTGA
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| Protein sequence | MMANRLQALQ QQLAQRIMVL DGGMGTMIQS YRLQEEDYRG ERFADWHCDL KGNNDLLVLS
KPEVITAIHH DYLAAGADIL ETNTFNATRI AMADYEMEAL SAEINTVAAR LARACADEWT
ARTPERPRYV AGVLGPTNRT ASISPDVNDP AYRNVSFDQL VDAYRESTRA LVEGGVDIIL
IETIFDTLNA KAAIFAVETE FEALGVTLPV MLSGTITDAS GRTLSGQTTE AFYNSLRHAR
PLSFGLNCAL GPDELRQYVA ELSRIAECYV TAHPNAGLPN AFGEYDLDAD EMARQIGEWA
QSGFLNIIGG CCGTTPEHIA AMVNAVEGVA PRALPTLPVA CRLAGLEPLN IGDDTLFVNV
GERTNVTGSA KFKRLIKEEK YNEALDVARQ QVESGAQIID INMDEGMLNA EAAMVRFLNL
IAGEPDIARV PIMIDSSKWD VVEAGLKCIQ GKGIVNSISM KEGVDAFVHH ARLVRRYGAA
VVVMAFDEVG QADTRARKIE ICRRAYHILT EEVGFPPEDI IFDPNIFAVA TGIDEHNNYA
VDFIEACADI KAQLPHALIS GGVSNVSFSF RGNEPVREAI HAVFLYYAIR NGMDMGIVNA
GQLAIYDDLP AELRDAVEDV ILNRRDDGTE RMLEIAEKYR GSKSDDDSNK GAAEWRGWPV
RKRLEYALVK GITEFIEQDT EEARAESARP IEVIEGPLMD GMNVVGDLFG AGKMFLPQVV
KSARVMKQAV AYLEPFIQAS KDQGSSAGKI LLATVKGDVH DIGKNIVGVV LQCNNYEIID
LGVMVPTDKI LKTAREEKVD IIGLSGLITP SLDEMVNVAK EMERQGFTLP LLIGGATTSK
AHTAVKIEQN YSGPTVYVQN ASRSVGVVSA LLSDTQRDDF VARIRKEYET VRIQHGRKKP
RTPPVSLGVA RDNAMPIDWE SYTPPVAHRL GVQPVTASIE TLRNYIDWTP FFMTWSLAGK
YPNILEDEVV GEEAKRLFAD ANAMLDTLSA SGTLNPRGVV GLFPANRVGD DVEIYTDERR
TEVLTVSHHL RQQTEKTDFP NYCLADVVAP KASGKPDYLG AFAVTGGLEE DALAAQWEAQ
HDDYNKIMLK ALADRLAEAF AEYLHERVRK VYWGYAPNEN LGNDELIREN YQGIRPAPGY
PACPDHTEKA AIWQLLDVDN TVGMKLTESY AMWPGASVSG WYFSHPDSKY FAVAQIQRDQ
VEDYAVRKQM PVEEIERWLA PNLGYDAD
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