| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0361 |
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| Symbol | |
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| ID | 8116923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | + |
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| Start bp | 397949 |
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| End bp | 398776 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644850750 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_003002730 |
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| Protein GI | 251788009 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0156033 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCCGTGA GTCAATCTTT TGCGGTTTTT GGCCATCCTA TCGCGCATAG CAAATCGCCA
CGTATTCATT CGCTATTTGC TGAGCAAACG GGAATTTCGC TGACCTACGA GCGCATTCTT
GCGCCGTTGG ATGGTTTTGA TAGTAGCCTG AAAATGTTTT TTCAACGTGG TGCATGTGGC
GCCAATGTGA CGGCACCATT CAAAGAGCGT GCATGTGCGG CTATGGATGA ATTGAGCGAG
CGTGCTCGCT CTGCTGGTGC GGTCAATACG ATTCAAAAGA AAGGTGATGG TTCGCTTTAT
GGTGATAATA CCGACGGCAT AGGGCTGCTG AGTGATTTGC AGCAGAATGC ATTTATCCAA
CCTCATTATC GGGTGTTGTT GGTCGGGGCG GGTGGTGCTG CACGCGGTGT TATTCAGCCT
TTGCTTGCAT ACGGGTGTGA GTTAGTTATC GCTAACCGAA CATTTGCCAG AGCTGGCGCG
CTGGCTGAGC ATTTTGGCCG TTACGGTCAG GTGAGTGCGT TGTCGATGGA TGCATTAAGT
GACCATCGTT TTGATTTGAT TATCAATGCT ACGTCATCAG GGGTAATGGG CGATATCCCT
GATCTACCTG TGTCTCTGAT TTCTCCTGAT GTATGTTGCT ATGACATGTT TTATCAGGCC
GAGCCGACTC CTTTTTTGAC GTGGTGTATC CAACAAGGGG CACAACGGTA TGTTGATGGA
ATGGGAATGT TGGTCTGGCA GGCGGCACAT GCGTTCAGTT TGTGGCACGG TATCATGCCG
GACGCTGTGC CGGTAATTCG TAAAATGAAG CAGGAACTGG GGGAATGA
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| Protein sequence | MPVSQSFAVF GHPIAHSKSP RIHSLFAEQT GISLTYERIL APLDGFDSSL KMFFQRGACG
ANVTAPFKER ACAAMDELSE RARSAGAVNT IQKKGDGSLY GDNTDGIGLL SDLQQNAFIQ
PHYRVLLVGA GGAARGVIQP LLAYGCELVI ANRTFARAGA LAEHFGRYGQ VSALSMDALS
DHRFDLIINA TSSGVMGDIP DLPVSLISPD VCCYDMFYQA EPTPFLTWCI QQGAQRYVDG
MGMLVWQAAH AFSLWHGIMP DAVPVIRKMK QELGE
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