Gene Dd1591_0359 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_0359 
Symbol 
ID8116921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand+ 
Start bp396810 
End bp397367 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content49% 
IMG OID644850748 
ProductDNA topoisomerase type IA zn finger domain protein 
Protein accessionYP_003002728 
Protein GI251788007 
COG category[L] Replication, recombination and repair 
COG ID[COG0551] Zn-finger domain associated with topoisomerase type I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.0044685 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAAA CCCTTGTTGC TGAAAAGCAT CAGCAGGTGT GCCCCGAATG TGGGGCCGTG 
CTGGTTATCC GTTCTGGGCA GCACGGCCCT TTTCTTGGCT GTTCGCGTTA TCCTGAATGC 
CGCTATATCC GGTCGCTTAA AGCCAATGCC GATGGACATG TGGTAAAAGT ACTGGATGGT 
CACTATTGCC CCCGTTGCCA ATCGACGCTC GTGTTGCGTC AAGGTCGCTA TGGCATGTTC 
ATTGGTTGTA GCAACTATCC GGAATGTGAT CATACAGAGG CGATTGATCG TCCGGATGAG 
ACAGCCTTGA TATGCCCTCA ATGTCGTGAA GGCCGATTGC TGCAGCGCAA GTCTCGTTAT 
GGTAAGACGT TTCACGCTTG TGAGCGCTAC CCCGTTTGTC AGTTCACGCT TAATTACAAG 
CCGATCGCGG GGGAATGTGG GTATTGCCAT TATCCATTAT TGATAGAGAA GAAAACGGCA 
CAAGGCATTA GGCATTTTTG TGCCAGTAAA TTGTGTGGAA AGCTTGTATC GGCTGAAGAA 
CACCATTGTG ATGAGTAA
 
Protein sequence
MNKTLVAEKH QQVCPECGAV LVIRSGQHGP FLGCSRYPEC RYIRSLKANA DGHVVKVLDG 
HYCPRCQSTL VLRQGRYGMF IGCSNYPECD HTEAIDRPDE TALICPQCRE GRLLQRKSRY 
GKTFHACERY PVCQFTLNYK PIAGECGYCH YPLLIEKKTA QGIRHFCASK LCGKLVSAEE 
HHCDE