| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0356 |
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| Symbol | def |
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| ID | 8116918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 394589 |
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| End bp | 395098 |
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| Gene Length | 510 bp |
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| Protein Length | 169 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644850745 |
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| Product | peptide deformylase |
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| Protein accession | YP_003002725 |
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| Protein GI | 251788004 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.25208 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCAGTCT TGCAAGTATT ACATTTTCCC GATGAGCGGC TTCGCATTCA GGCAAAGCCG
GTAAAAGAAG TTAATGCGGA AATTCAGCGT ATCGTGGACG ATATGTTCGA CACGATGTAC
GAGGAAGAAG GTATTGGCCT TGCCGCCACA CAAGTTGATA TCCACCAGCG CATCATTGTG
ATCGATGTTT CGGAAGAACG GGATCAGCGA CTAGTACTGA TTAACCCGGA ATTACTGGAA
AAATCCGGTG ATACCGGAAT TGAAGAGGGC TGTTTGTCCA TTCCAGAAAC ACGTGCACTG
GTTCCACGAG CAGAGCATGT CAAAGTACGG GCCTTGGATC GTGAAGGTAA ACCATTTGAA
CTCGAAGCCG ATGGATTACT GGCAATCTGC ATTCAGCATG AAATGGACCA CTTGATTGGT
AAATTGTTTG TCGACTATCT GTCACCGCTG AAGCGTCAGC GTATTCGCCA AAAGCTGGAA
AAATTGGCCA GACAAAACAG CAAAGCATAG
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| Protein sequence | MSVLQVLHFP DERLRIQAKP VKEVNAEIQR IVDDMFDTMY EEEGIGLAAT QVDIHQRIIV
IDVSEERDQR LVLINPELLE KSGDTGIEEG CLSIPETRAL VPRAEHVKVR ALDREGKPFE
LEADGLLAIC IQHEMDHLIG KLFVDYLSPL KRQRIRQKLE KLARQNSKA
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