Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_0340 |
Symbol | rpsE |
ID | 8116902 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | + |
Start bp | 383874 |
End bp | 384374 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644850729 |
Product | 30S ribosomal protein S5 |
Protein accession | YP_003002709 |
Protein GI | 251787988 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0098] Ribosomal protein S5 |
TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000106255 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCACA TCGAAAAACA AGCTGGCGAA CTGCAGGAAA AGCTGATCGC GGTAAATCGC GTATCTAAAA CCGTTAAGGG TGGTCGTATT TTCTCCTTCA CAGCGCTGAC TGTGGTAGGT GATGGTAACG GTCGCGTAGG TTTTGGTTAC GGTAAAGCAC GCGAAGTTCC GGCAGCGATC CAGAAAGCGA TGGAAAAAGC CCGTCGCAAT ATGATGAATG TCGCGCTGAA CAACGGCACT CTGCAGCACC CGGTTAAAGG TGCGCACACA GGTTCTCGTG TGTTCATGCA GCCAGCTTCC GAAGGTACCG GTATCATCGC CGGTGGTGCA ATGCGCGCCG TTCTGGAAGT TGCAGGGGTT CACAACGTAT TGGCTAAAGC CTATGGTTCC ACAAACCCGA TTAACGTGGT TCGTGCAACT ATCGATGGCC TGGCTAACAT GAAGTCCCCG GAAATGGTCG CTGCCAAGCG TGGTAAATCC GTTGAAGACA TTCTGGGGTA A
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Protein sequence | MAHIEKQAGE LQEKLIAVNR VSKTVKGGRI FSFTALTVVG DGNGRVGFGY GKAREVPAAI QKAMEKARRN MMNVALNNGT LQHPVKGAHT GSRVFMQPAS EGTGIIAGGA MRAVLEVAGV HNVLAKAYGS TNPINVVRAT IDGLANMKSP EMVAAKRGKS VEDILG
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