| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0265 |
|---|
| Symbol | |
|---|
| ID | 8118587 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 318701 |
|---|
| End bp | 319399 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644850656 |
|---|
| Product | phosphoglycolate phosphatase |
|---|
| Protein accession | YP_003002636 |
|---|
| Protein GI | 251787915 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0546] Predicted phosphatases |
|---|
| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.210779 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGATT TTGCTGCGAT TCGTGGGTTG GCGTTTGATC TGGATGGTAC GCTGGTCAAC
AGTGCGCCGG GGCTGGCTAA AGCCGTGGAT ATGGCATTAG GTGCGTTGTC GCTGCCCCAT
GCGGGCGAAG AGCGGGTATC GACCTGGATT GGCAACGGCG CCGATGTGCT GGTGGAACGT
GCATTACGTT GGGCGGGGAT GGAGCCGACG GACAGGCAGA TTCAGGACGC CCGAACGCTG
TTCGATAAGT ATTATGCCCG CACGGTAGAC AGCGGCAGTC TATTGTTCCC AGAGGTGCAG
GACACACTGG CCGAACTGGC CGGACGCGGT TTTCGTATGG CGGTGGTCAC CAATAAACCG
ACGCCGTTTG TCGCGCCGCT GCTGGATATG CTGGGGATTG GGCGCTATTT CTCGCTGATT
TTGGGCGGCG ATGACGTAAC CGAGAAAAAA CCGCATCCGG CACCGTTATA TATGGTGCTG
GGTAAGTTGG GTCTACGGGT GAACGAATTG CTGTTTGTCG GCGACTCGCG TAATGATATA
CAGGCAGCCC GCGCTGCCGG ATGCCCTTGC GTCGGTATGA CGTACGGTTA TAACTACGGC
GAGGCGATCG CCCTGAGTCA CCCTGACGTG GTGTTGGATC GCTTTGCGGA TTTATTGACC
CTTGATGGGT TACCCTTTTT AAACGATCAG GAAGCATGA
|
|---|
| Protein sequence | MTDFAAIRGL AFDLDGTLVN SAPGLAKAVD MALGALSLPH AGEERVSTWI GNGADVLVER
ALRWAGMEPT DRQIQDARTL FDKYYARTVD SGSLLFPEVQ DTLAELAGRG FRMAVVTNKP
TPFVAPLLDM LGIGRYFSLI LGGDDVTEKK PHPAPLYMVL GKLGLRVNEL LFVGDSRNDI
QAARAAGCPC VGMTYGYNYG EAIALSHPDV VLDRFADLLT LDGLPFLNDQ EA
|
|---|
| |