| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0222 |
|---|
| Symbol | |
|---|
| ID | 8117184 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 265269 |
|---|
| End bp | 266954 |
|---|
| Gene Length | 1686 bp |
|---|
| Protein Length | 561 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644850614 |
|---|
| Product | signal transduction histidine kinase, LytS |
|---|
| Protein accession | YP_003002594 |
|---|
| Protein GI | 251787873 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3275] Putative regulator of cell autolysis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCAGTC AGGTTGAGTT AATTCTGTCA TTGCTGCAGC AGACATGCGT CTATCTGGTC
ATCGCTTATC TGTTAAGTAA AACGCCGCTG TTCACTCCGC TAACGCAGGT CACGCTCCAT
CTGCCGCACA AGCTTATCTG CTACCTGACG TTCTCCATGT TCTGCATTCT CGGCACCTAT
TTCGGCCTGC ATATCGACGA CTCCATCGCC AATACCCGCG CCATCGGCGC GCTGCTGGGT
GGTGTACTGG GCGGCCCTTC GGTCGGTATG CTGGTCGGGT TCACCGGCGG ATTGCACCGT
TATTCACTGG GCGGCATGAC GGCGATGGCC TGCATGGTGT CCACTACGTT GGAAGGGCTG
GTCGGCGGGT TGCTGCACCG CTATATGATT CGTCACCACC GCATCGACCT GTTATTCCAG
CCGCTGGTTA TCGCCGCCGT CACCCTGTTG GTGGAAATAG TGCAGATGAG CATCATCCTG
CTGCTGTCGC GCCCGTTTGG CGACGCGCTG ATGCTGGTCA AAAGCATCGC CTTGCCGATG
ATGATTACCA ACAGCATCGG AGCGGCGATG TTCATGCGGA TACTGCTGGA CCGCCGGGCG
GTGTTTGAAA AGTACACCTC GGCATTTTCC GCCCGCGCAT TGCAGATTGC CGCCCGGGCG
GAAGGTATAC TGCGCCAGGG ATTCAATCCG GGAACCAGTA TGCGGGTCGC CCGCATACTG
TATGAAGAGT TGGGCGTCGG CGCCGTCGCC ATCACCGACC GGGAAAAACT GCTGGCGTTT
ATCGGCATCG GCGACGAGCA CCACAGAGTC GGCACGCTGA TTACCTCATC CCACACCCAT
CAGGCTATCG ACAACAATGA AGTGGTGTAC GCCGATGGCA ACGAAATACC GTTTTGCTGC
TCGGTTTCGC CGCAATGTAA GCTCGGCTCG ACGCTGGTGA TCCCACTGCG TGGCGAAGAA
CAACGGGTGG TCGGCACCAT CAAATTGTAT GAGCCGAAAA ACAAGTTATT TTCCAGTATC
AACCGGACGC TGGGGGAAGG TATCGGCCAT CTGCTGTCAG CCCAAATTTT CGCCGGCCGT
TTCGAACAAC AGAAGCAGTT GCTGGCGCAA TCCGAAATCA AGCTGCTGCA CGCGCAGGTC
AACCCGCATT TCCTGTTCAA TACCCTGAAT ACGCTGTCGG CGATTATTCG ACGCAATCCA
GACCAGGCTC GCCAGTTGGT GCTGTCGTTG TCGACGTTTT TTCGCAAAAA TCTCAAGCGC
AGCGGCGACG AAGTCACACT CGGCGATGAG CTGGAGCATA TCAGCGCGTA CCTCGACATT
GAAAAAGCGC GGTTCACCAA CCTGTTGACG GTAGAGATCG CCGTTCCTTT ATCGCTCCGA
TCCGCCAGAC TACCGGCTTT TTCTTTACAG CCGCTGGTGG AAAACGCCAT CAAACACGGT
ATTTCCCACA TGCTGGATGA CGGCCGCCTG CGTATCGACG CGCGCACCCA CGCCAATATG
CTGGAACTCA CGATAGAGGA CAACGCCGGC GCTTATTACC CGCGCAACGG CAGCGACGGA
CTGGGGATGA ATCTGGTGGA TCGACGCGTT AAAGCACGTT ACGGCCATCA CTACGGCATC
ACCGTCACCA GCGAGCCGAA TCGCTTTACC CGCGTAAAGG TGCGCGTACC ACTACGGATG
GCATAA
|
|---|
| Protein sequence | MVSQVELILS LLQQTCVYLV IAYLLSKTPL FTPLTQVTLH LPHKLICYLT FSMFCILGTY
FGLHIDDSIA NTRAIGALLG GVLGGPSVGM LVGFTGGLHR YSLGGMTAMA CMVSTTLEGL
VGGLLHRYMI RHHRIDLLFQ PLVIAAVTLL VEIVQMSIIL LLSRPFGDAL MLVKSIALPM
MITNSIGAAM FMRILLDRRA VFEKYTSAFS ARALQIAARA EGILRQGFNP GTSMRVARIL
YEELGVGAVA ITDREKLLAF IGIGDEHHRV GTLITSSHTH QAIDNNEVVY ADGNEIPFCC
SVSPQCKLGS TLVIPLRGEE QRVVGTIKLY EPKNKLFSSI NRTLGEGIGH LLSAQIFAGR
FEQQKQLLAQ SEIKLLHAQV NPHFLFNTLN TLSAIIRRNP DQARQLVLSL STFFRKNLKR
SGDEVTLGDE LEHISAYLDI EKARFTNLLT VEIAVPLSLR SARLPAFSLQ PLVENAIKHG
ISHMLDDGRL RIDARTHANM LELTIEDNAG AYYPRNGSDG LGMNLVDRRV KARYGHHYGI
TVTSEPNRFT RVKVRVPLRM A
|
|---|
| |