Gene Dd1591_0220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_0220 
Symbol 
ID8117182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp263936 
End bp264355 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content61% 
IMG OID644850612 
Producttranscriptional regulator NikR, CopG family 
Protein accessionYP_003002592 
Protein GI251787871 
COG category[K] Transcription 
COG ID[COG0864] Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain 
TIGRFAM ID[TIGR02793] nickel-responsive transcriptional regulator NikR 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACGAC TGACGATTTC TCTGGATGAC CCGCTGGCTG AGGCGCTGGA TGCGCTGATG 
CTGCGCAAAG GCTATGCCAA CCGGTCGGAA GCGTTTCGCG ATATGCTGCG GCGCGAGCTG
GGCGAAATGA CGGTGGCGCA GGATAAAAAC GCCGAGTGTG TGGCGGTGCT GAGCTATGTG
TATGACCACC ACGAACGCCA GTTGTCGAGC CGGCTGGCGG GGATGCAGCA TGAACACCAT
CACCTGACCG TTTCCACCAT GCACACGCAC CTCAGCCATG ACGAGTGTGT GGAAACCGTG
ATCCTGCGCG GCCCCACTGA GCGTGTAGAG CAGTTTGCCG CGTCGGTTAT CGCTCAGACC
GGCGTGCGCC ACGGCCGGCT GAACCTGATC CCGATGGAGC AGGCCGCCGC TAAGGAATAA
 
Protein sequence
MQRLTISLDD PLAEALDALM LRKGYANRSE AFRDMLRREL GEMTVAQDKN AECVAVLSYV 
YDHHERQLSS RLAGMQHEHH HLTVSTMHTH LSHDECVETV ILRGPTERVE QFAASVIAQT
GVRHGRLNLI PMEQAAAKE