| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0195 |
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| Symbol | rhtB |
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| ID | 8117157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 235635 |
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| End bp | 236255 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644850587 |
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| Product | homoserine/homoserine lactone efflux protein |
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| Protein accession | YP_003002567 |
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| Protein GI | 251787846 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1280] Putative threonine efflux protein |
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| TIGRFAM ID | [TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0042632 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCCAGG ACTGGTGGTT AACCTACCTT GTCACCACAT TAATTTTGAG CCTGTCGCCC
GGCTCCGGCG CCATCAACAC CATGAGCACC AGCATCAGCC ACGGTTACCG CGGCGCGGTA
GCCTCCATCG CCGGGCTGCA ACTGGGTTTG GTTATCCACA TCGTGCTGGT AGGTATCGGC
CTGGGGGCGT TGTTATCTCA GTCGGTGCTG GCGTTTGACA TGCTGAAATG GTTCGGCGCC
GCTTACCTGA TCTGGTTGGG TATTCAACAA TGGCGCAGCG CCGGCTCGCT GGACTTGCAG
ACGCTGGCTA ACAGTATGCC GCGCCGTCGG CTGTTCAAAC GGGCGATTCT GGTTAACCTG
ACCAACCCGA AAAGTATCGT GTTTCTGGCG GCGCTGTTTC CGCAGTTTAT TATCCCGCAT
CAGCCCCAGG CAATGCAGTA TCTGGTGCTG GGCGTCACTA CCGTGGTCGT GGATGTGGTC
GTGATGATTG GTTATGCCAC GCTGGCGCGG CGCATCGCGC TGTGGCTGAA AGGCCCACGT
CAGCTCAAAC AACTGAATCG GACCTTCGGG TCGCTGTTCA TGCTGGTCGG CGCACTGCTG
GCGACGGCAC GCAAAGCCTG A
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| Protein sequence | MTQDWWLTYL VTTLILSLSP GSGAINTMST SISHGYRGAV ASIAGLQLGL VIHIVLVGIG
LGALLSQSVL AFDMLKWFGA AYLIWLGIQQ WRSAGSLDLQ TLANSMPRRR LFKRAILVNL
TNPKSIVFLA ALFPQFIIPH QPQAMQYLVL GVTTVVVDVV VMIGYATLAR RIALWLKGPR
QLKQLNRTFG SLFMLVGALL ATARKA
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