| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0183 |
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| Symbol | dapF |
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| ID | 8117145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | + |
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| Start bp | 222337 |
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| End bp | 223161 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644850575 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_003002555 |
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| Protein GI | 251787834 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.190067 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAGTTCT CTAAAATGCA CGGTCTGGGC AATGATTTCA TGGTTGTCGA TGCCGTGACG
CAGAATGTCT ATTTTTCACC GGAACTGATC CGCCGCTTGT CGGATCGGCA TTGTGGGGTG
GGGTTTGATC AACTGTTGAT CGTCGAACCG CCTTACGATC CCGAACTGGA TTTTCACTAC
CGGATCTTCA ATGCCGACGG CAGCGAAGTG GCGCAGTGTG GCAATGGCGC GCGCTGCTTT
GCGCGTTTTG TCCGCCTGAA AGGGTTGACC AGCAAGCGTG AGATTAACGT CAGTACGCAT
AACGGCCGCA TGGTGCTGTC GGTAACGGAA GATGAACTGG TGCGGGTCAA TATGGGCGAG
CCCAATTTTG AGCCTCAGCA GGTGCCGTTT CGCGCCGTGA AGCCGGAAAA AACCTATATT
CTGCGTGCCG CTGAACGCAC GGTATTGTGC GGCGTGGTGT CGATGGGTAA CCCGCACTGC
GTGCTTCAAG TGGAAAATGT CGATAGCGCG TCGGTGGAAG AATTAGGGCC GTTGCTGGAA
AACCATGAGC GCTTCCCGGA GCGCGCCAAC GTCGGCTTTA TGCAGGTGGT CAATCCTCAT
CTTATCCGGC TGCGTGTGTT CGAACGTGGT GCGGGTGAAA CGCAAGCCTG TGGCAGCGGC
GCTTGCGCTG CTGTGGCGGT CGGCATCCAG CAAGGGTTGC TGGCGGCGGA TGTCAAAGTG
CAATTGCCGG GCGGCGAACT GGACATTCAT TGGGACGGCC CCGGCCAGCC GCTGTTTATG
ACCGGCCCGG CAACCCATGT TTATGATGGA TTTATTCATC TATGA
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| Protein sequence | MQFSKMHGLG NDFMVVDAVT QNVYFSPELI RRLSDRHCGV GFDQLLIVEP PYDPELDFHY
RIFNADGSEV AQCGNGARCF ARFVRLKGLT SKREINVSTH NGRMVLSVTE DELVRVNMGE
PNFEPQQVPF RAVKPEKTYI LRAAERTVLC GVVSMGNPHC VLQVENVDSA SVEELGPLLE
NHERFPERAN VGFMQVVNPH LIRLRVFERG AGETQACGSG ACAAVAVGIQ QGLLAADVKV
QLPGGELDIH WDGPGQPLFM TGPATHVYDG FIHL
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