| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0179 |
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| Symbol | |
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| ID | 8117141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 217804 |
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| End bp | 218772 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644850571 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_003002551 |
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| Protein GI | 251787830 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00121296 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAAAA AGGATCAATA CGGTACAAGC ATGGTAGACA CTATTCTAAG AATCGCCACC
CGACAGAGCC CGCTGGCATT ATGGCAGGCT CACTTTGTGA AGCAGCGTCT GGAAGACTGC
CACCCCGGTT TACAGGTTGA ACTGGTGCCA ATGGTCACCC GCGGCGATGT ATTGCTGGAT
ACACCGCTGG CCAAAGTCGG TGGAAAAGGA TTGTTCGTCA AAGAGTTAGA GCTGGCGCTA
CTGGAAAACC GTGCCGATAT CGCGGTGCAT TCCATGAAAG ATGTACCGGT CGAATTTCCT
GAGGGGCTGG GGCTGGTCAC CATCTGTGAG CGTGACGATC CGCGCGACGC CTTTGTCTCC
AACCACTACG CTACGCTTGA CGATCTGCCG GAAGGCGCTT GCGTAGGGAC TTCCAGCTTG
CGTCGCCAAT GCCAGTTGCG CGCCTACCGG CCGGACCTGG TCGTGCGTGA TCTGCGCGGT
AACGTCGGCA CCCGCTTATC CAAACTGGAT AACGGCGACT ACGACGCAAT TATTCTGGCG
GTTGCGGGGC TAAAACGCCT CGGTCTGGCA CATCGTATCC GTACCGCGCT CAGCCCGGAA
CAATCGTTGC CGGCGGTCGG TCAGGGCGCG GTTGGCGTGG AGTGCCGGCT GGATGACGCC
CGTACCCGCG CACTGCTGGC ACCGCTCAAT CATGAGGATA CCGCAACGCG GGTGCTGGCC
GAGCGGGCGA TGAATACCCG GCTCGAAGGC GGTTGCCAGG TTCCTATCGG CAGTTACGCC
GAACTGCAGG ATGAGACGTT ATATCTGCGG GCGCTGGTGG GCGCACCGGA CGGCAGCCGC
ATTATTTATG CCGAACGCCG CGGCTCGCGT CAGGATGCCG AAACACTTGG CATCGCCCTG
GCGGACGAAC TACTCGAACG CGGCGCGCGT GATATTCTGC AATCGGTTTA CGGAGGAGCC
TCGTCATGA
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| Protein sequence | MDKKDQYGTS MVDTILRIAT RQSPLALWQA HFVKQRLEDC HPGLQVELVP MVTRGDVLLD
TPLAKVGGKG LFVKELELAL LENRADIAVH SMKDVPVEFP EGLGLVTICE RDDPRDAFVS
NHYATLDDLP EGACVGTSSL RRQCQLRAYR PDLVVRDLRG NVGTRLSKLD NGDYDAIILA
VAGLKRLGLA HRIRTALSPE QSLPAVGQGA VGVECRLDDA RTRALLAPLN HEDTATRVLA
ERAMNTRLEG GCQVPIGSYA ELQDETLYLR ALVGAPDGSR IIYAERRGSR QDAETLGIAL
ADELLERGAR DILQSVYGGA SS
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