Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_0157 |
Symbol | |
ID | 8117115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | + |
Start bp | 193133 |
End bp | 194392 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644850545 |
Product | transcription termination factor Rho |
Protein accession | YP_003002529 |
Protein GI | 251787808 |
COG category | [K] Transcription |
COG ID | [COG1158] Transcription termination factor |
TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATCTTA CCGAATTAAA AAATACGCCA GTGTCTGAGT TAATTACTCT TGGCGAAAAT ATGGGGCTGG AGAATCTGGC TCGCATGCGT AAACAGGATA TTATTTTCGC TATCCTCAAG CAGCACGCGA AAAGTGGTGA AGACATCTTT GGCGATGGCG TACTGGAAAT ATTGCAGGAT GGTTTTGGTT TCCTCCGCTC CGCAGACAGC TCCTACCTCG CCGGCCCTGA TGATATCTAC GTTTCCCCCA GCCAAATCCG ACGCTTCAAC CTCCGCACTG GCGACACCAT TTCCGGTAAG ATTCGTCCTC CGAAAGAAGG TGAACGCTAT TTCGCGCTGT TGAAGGTTAA CGAAGTTAAC TATGACAAAC CGGAAAATGC CCGCAGCAAA ATCCTGTTTG AAAACCTGAC GCCGCTGCAC GCCAATTCGC GTCTGCGTAT GGAGCGCGGT AACGGTTCTA CCGAAGACCT GACCGCTCGC GTACTGGATC TGGCCTCGCC GATCGGTCGT GGGCAGCGTG GCTTGATCGT CGCGCCGCCG AAAGCCGGTA AAACCATGCT GCTGCAAAAC ATCGCTCAGA GCATCGCTTA CAACCATCCT GATTGCGTGC TGATGGTGCT GCTGATTGAT GAACGTCCTG AAGAAGTGAC GGAAATGCAG CGCTTGGTGA AAGGGGAAGT GGTTGCGTCA ACCTTCGACG AACCCGCCTC TCGCCATGTT CAGGTTGCCG AAATGGTGAT CGAGAAAGCC AAGCGCTTGG TTGAGCACAA AAAAGACGTG ATTATTCTGT TGGACTCGAT AACCCGTCTG GCCCGTGCTT ACAACACCGT GGTGCCGGCA TCCGGCAAAG TGCTGACTGG TGGTGTCGAC GCGAACGCCC TGCATCGTCC GAAGCGTTTC TTCGGTGCGG CCCGTAACGT TGAGGAAGGC GGCAGCCTGA CGATCATCGC TACCGCGCTG ATCGATACCG GTTCGAAGAT GGACGAAGTG ATTTACGAAG AGTTCAAAGG CACCGGTAAC ATGGAATTGC ACCTGTCTCG TAAGATTGCT GAAAAACGCG TGTTCCCGGC CATCGACTAC AACCGCTCCG GTACTCGTAA GGAAGAGCTG TTGACCACGT CCGAAGAGCT GCAGAAAATG TGGATTCTGC GCAAGATTAT CCATCCGATG GGTGAAACCG ATGCGATGGA GTTCCTGATC AACAAACTGG CGATGACCAA AACCAACGAC GAATTCTTCG ATATGATGAA ACGTTCGTAA
|
Protein sequence | MNLTELKNTP VSELITLGEN MGLENLARMR KQDIIFAILK QHAKSGEDIF GDGVLEILQD GFGFLRSADS SYLAGPDDIY VSPSQIRRFN LRTGDTISGK IRPPKEGERY FALLKVNEVN YDKPENARSK ILFENLTPLH ANSRLRMERG NGSTEDLTAR VLDLASPIGR GQRGLIVAPP KAGKTMLLQN IAQSIAYNHP DCVLMVLLID ERPEEVTEMQ RLVKGEVVAS TFDEPASRHV QVAEMVIEKA KRLVEHKKDV IILLDSITRL ARAYNTVVPA SGKVLTGGVD ANALHRPKRF FGAARNVEEG GSLTIIATAL IDTGSKMDEV IYEEFKGTGN MELHLSRKIA EKRVFPAIDY NRSGTRKEEL LTTSEELQKM WILRKIIHPM GETDAMEFLI NKLAMTKTND EFFDMMKRS
|
| |