Gene Dd1591_0157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_0157 
Symbol 
ID8117115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp193133 
End bp194392 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content52% 
IMG OID644850545 
Producttranscription termination factor Rho 
Protein accessionYP_003002529 
Protein GI251787808 
COG category[K] Transcription 
COG ID[COG1158] Transcription termination factor 
TIGRFAM ID[TIGR00767] transcription termination factor Rho 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTTA CCGAATTAAA AAATACGCCA GTGTCTGAGT TAATTACTCT TGGCGAAAAT 
ATGGGGCTGG AGAATCTGGC TCGCATGCGT AAACAGGATA TTATTTTCGC TATCCTCAAG
CAGCACGCGA AAAGTGGTGA AGACATCTTT GGCGATGGCG TACTGGAAAT ATTGCAGGAT
GGTTTTGGTT TCCTCCGCTC CGCAGACAGC TCCTACCTCG CCGGCCCTGA TGATATCTAC
GTTTCCCCCA GCCAAATCCG ACGCTTCAAC CTCCGCACTG GCGACACCAT TTCCGGTAAG
ATTCGTCCTC CGAAAGAAGG TGAACGCTAT TTCGCGCTGT TGAAGGTTAA CGAAGTTAAC
TATGACAAAC CGGAAAATGC CCGCAGCAAA ATCCTGTTTG AAAACCTGAC GCCGCTGCAC
GCCAATTCGC GTCTGCGTAT GGAGCGCGGT AACGGTTCTA CCGAAGACCT GACCGCTCGC
GTACTGGATC TGGCCTCGCC GATCGGTCGT GGGCAGCGTG GCTTGATCGT CGCGCCGCCG
AAAGCCGGTA AAACCATGCT GCTGCAAAAC ATCGCTCAGA GCATCGCTTA CAACCATCCT
GATTGCGTGC TGATGGTGCT GCTGATTGAT GAACGTCCTG AAGAAGTGAC GGAAATGCAG
CGCTTGGTGA AAGGGGAAGT GGTTGCGTCA ACCTTCGACG AACCCGCCTC TCGCCATGTT
CAGGTTGCCG AAATGGTGAT CGAGAAAGCC AAGCGCTTGG TTGAGCACAA AAAAGACGTG
ATTATTCTGT TGGACTCGAT AACCCGTCTG GCCCGTGCTT ACAACACCGT GGTGCCGGCA
TCCGGCAAAG TGCTGACTGG TGGTGTCGAC GCGAACGCCC TGCATCGTCC GAAGCGTTTC
TTCGGTGCGG CCCGTAACGT TGAGGAAGGC GGCAGCCTGA CGATCATCGC TACCGCGCTG
ATCGATACCG GTTCGAAGAT GGACGAAGTG ATTTACGAAG AGTTCAAAGG CACCGGTAAC
ATGGAATTGC ACCTGTCTCG TAAGATTGCT GAAAAACGCG TGTTCCCGGC CATCGACTAC
AACCGCTCCG GTACTCGTAA GGAAGAGCTG TTGACCACGT CCGAAGAGCT GCAGAAAATG
TGGATTCTGC GCAAGATTAT CCATCCGATG GGTGAAACCG ATGCGATGGA GTTCCTGATC
AACAAACTGG CGATGACCAA AACCAACGAC GAATTCTTCG ATATGATGAA ACGTTCGTAA
 
Protein sequence
MNLTELKNTP VSELITLGEN MGLENLARMR KQDIIFAILK QHAKSGEDIF GDGVLEILQD 
GFGFLRSADS SYLAGPDDIY VSPSQIRRFN LRTGDTISGK IRPPKEGERY FALLKVNEVN
YDKPENARSK ILFENLTPLH ANSRLRMERG NGSTEDLTAR VLDLASPIGR GQRGLIVAPP
KAGKTMLLQN IAQSIAYNHP DCVLMVLLID ERPEEVTEMQ RLVKGEVVAS TFDEPASRHV
QVAEMVIEKA KRLVEHKKDV IILLDSITRL ARAYNTVVPA SGKVLTGGVD ANALHRPKRF
FGAARNVEEG GSLTIIATAL IDTGSKMDEV IYEEFKGTGN MELHLSRKIA EKRVFPAIDY
NRSGTRKEEL LTTSEELQKM WILRKIIHPM GETDAMEFLI NKLAMTKTND EFFDMMKRS