Gene Dd1591_0129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_0129 
Symbol 
ID8117080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand+ 
Start bp149465 
End bp150121 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content54% 
IMG OID644850510 
ProductDNA-binding transcriptional repressor FabR 
Protein accessionYP_003002501 
Protein GI251787780 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.555645 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGCGG GCAGGATAAT GGGTGTCAGA GCACAACAAA AAGAACGAAC TCGCCGTTCC 
CTGGTTGAGG CCGCCTTCAG CCAGTTAAGT GCTGAACGTA GTTTTGCCAG CCTGAGTTTG 
CGTGAGGTAG CCCGTGAAGC AGGGATTGCG CCAACTTCGT TTTATCGCCA TTTTCGCGAT 
GTCGATGAAC TGGGGCTGAC CATGGTGGAT GAAAGCGGGC TGATGCTGCG TCAACTGATG 
CGACAGGCGC GCCAGCGCAT CGTCAAAAGC GGCGGCAGTG TGATTAGAAC GTCGGTATCG 
ACGTTTATGG AATTCATCGG TAACAATCCC AACGCCTTTC GGTTGCTATT GCGCGAGCGC 
TCCGGTACGT CAGCTGCGTT CCGTGCTGCG GTAGCGCGTG AAATTCAGCA TTTTATCGCT 
GAACTGGCCG ACTATCTTGA AGTCGAAAAT CATATTCCGC GCAGTTTCGC GGAAGCACAG 
TCGGAAGCGA TGGTGACGAT CGTCTTCAGC GCGGGCGCAG AGGCGCTGGA TGTCGATCTC 
GAGCAACGGC GCCAATTGGA AGAGCGGTTA GTATTGCAAC TGCGTATGAT TGCCAAGGGC 
GCTTATTACT GGTATCGCAA AGAGCAGGGT AAAGGGTTTT CTTACCCTGA AGGATAA
 
Protein sequence
MTAGRIMGVR AQQKERTRRS LVEAAFSQLS AERSFASLSL REVAREAGIA PTSFYRHFRD 
VDELGLTMVD ESGLMLRQLM RQARQRIVKS GGSVIRTSVS TFMEFIGNNP NAFRLLLRER 
SGTSAAFRAA VAREIQHFIA ELADYLEVEN HIPRSFAEAQ SEAMVTIVFS AGAEALDVDL 
EQRRQLEERL VLQLRMIAKG AYYWYRKEQG KGFSYPEG