| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0103 |
|---|
| Symbol | |
|---|
| ID | 8117054 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 122258 |
|---|
| End bp | 123028 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644850484 |
|---|
| Product | triosephosphate isomerase |
|---|
| Protein accession | YP_003002475 |
|---|
| Protein GI | 251787754 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0149] Triosephosphate isomerase |
|---|
| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGACACC CCTTAGTCAT GGGCAACTGG AAGCTGAACG GCAGTACCAG CATGGTTCAC
GAACTGATCG CCGGCCTGCG CAACGAACTG AGCACCGTCA CCGGTTGCGA CGTAGCCATC
GCGCCGCCAG CCATTTATCT GGATCAGGCA AAACACCTGC TGGCAGGTAG CCGTATTGTA
CTGGGTGCCC AAAACGTCGA CGTCAATCTT GCCGGCGCCT TCACCGGTGA AACCTCCGCC
GCCATGCTGA AAGACATCGG CGCCAAGTAC ATCATTATCG GCCACTCCGA ACGCCGCACC
TATCATCACG AAAGCGACGA ATTCATCGCC AAAAAATTCG CCGTGCTGAA AGAAACCGGC
CTGATTCCGG TACTGTGCAT CGGTGAAACC GAAGCCGAGA ATGAAGCGGG CCAGACCGAA
GCCGTCTGCG CACGTCAGTT GGATGCCGTG CTGAACTCGC TGGGTGCGCA AGCGTTCGAA
AATACCGTTA TTGCCTATGA ACCGGTATGG GCCATCGGCA CCGGCAAGTC CGCCACCCCG
GCGCAGGCGC AGGCAGTGCA TAAATTCATC CGCGACCACA TCGCTAAACA GGACGCGGCG
GTCGCTGAGC AAGTGATCAT TCAGTATGGT GGTTCGGTCA ACGCCGCCAA TGCAGCCGAG
CTGTTCACCC AGCCGGATAT CGACGGCGCT CTGGTGGGCG GCGCATCGCT GAAAGCCGAT
GCGTTCGCGG TCATCGTCAA AGCAGCGGCT GAAGCCAAAG GCCAGGCCTG A
|
|---|
| Protein sequence | MRHPLVMGNW KLNGSTSMVH ELIAGLRNEL STVTGCDVAI APPAIYLDQA KHLLAGSRIV
LGAQNVDVNL AGAFTGETSA AMLKDIGAKY IIIGHSERRT YHHESDEFIA KKFAVLKETG
LIPVLCIGET EAENEAGQTE AVCARQLDAV LNSLGAQAFE NTVIAYEPVW AIGTGKSATP
AQAQAVHKFI RDHIAKQDAA VAEQVIIQYG GSVNAANAAE LFTQPDIDGA LVGGASLKAD
AFAVIVKAAA EAKGQA
|
|---|
| |