Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_0035 |
Symbol | avtA |
ID | 8118980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | - |
Start bp | 39224 |
End bp | 40480 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644850416 |
Product | valine--pyruvate transaminase |
Protein accession | YP_003002407 |
Protein GI | 251787686 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3977] Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACTTTT CCCGTTTCGG CAACAAATTT ACCCGCCATG CCGGTATTAC CCAACTGATG GACGACCTGA ACGACGGGCT GCGCACCCCC GGCGCCATCA TGCTGGGCGG CGGTAATCCG GCCCATATTC CGGCGATGGA CGACTACTTT CAGCAGTTGT GTCGCGACCT GTTGGATCAA GGAAAACTGA CGGATGCGCT GTGCAACTAC GACGGCCCGC AAGGCAAAGA TGTACTGCTG CATTCACTCT CCGGCCTGCT GCGCGAACAG TTCGGCTGGG AGATTGGACC ACAGAATATT GCACTGACCA ACGGCAGCCA GAGCGCGTTT TTCTACCTGT TTAATCTGTT CGCCGGCCAA ACCGATGACG GCCAACGCCG TCGGGTACTG TTCCCGCTGG CGCCGGAATA CATCGGTTAT GCCGATTCCG GGCTGGATGA AGACATGTTC GTCTCCGTTC GCCCGCAGAT CGAGCTGCTG CCTGCCGGGC AATTCAAATA CCACGTCGAC TTCGAGCAAC TGCGCATCAC CGACGACATC GGCATGATTT GCGTCTCGCG GCCCACCAAC CCCACCGGCA ACGTACTGAC CGACGAGGAA CTGCTGCATC TGGACGCGCT GGCCCGCGAA CATCAGATTC CGCTGGTGAT CGACAACGCC TACGGCGTAC CGTTCCCCGG CATTATTTTC AGCGACGCCA CGCCGCTGTG GAACCCGAAC ATTATTCTGT GCATGAGCCT GTCCAAGCTC GGTTTGCCCG GTTCGCGCTG CGGCATCGTG ATCGGCTCGG AACACGTGAT CGAAGCACTC GGCAACATGA ACGGCATCGT CAGTCTGGCG CCCGGCTCCA TCGGCCCGGC GCTGGCGCAC GAGATGATTC AGCGTGGCGA CCTGCTGCGG CTGTCCAACG ACGTGGTGCG GCCGTTTTAC CGCCAGCGGG TGGAGCAGAC ACTCGCTATC ATTCGTCGCT ACCTGCCGCC GGAAGTGTGC CTGATCCACA AACCCGAAGG AGCGATCTTC CTGTGGCTGT GGTTCAAAGA CCTGCCTATC ACCACTGAGG TGCTGTACCA GCGGCTGAAA CAGCGCGGCG TGCTGATGGT GCCAGGCCAT TACTTCTTCC CCGGTCTGGA ACAGGAATGG CCGCACGCCC ACCAGTGCCT GCGCATGAAC TATGTGCCGG AGCCGGAAAA AATCGAACAG GGTGTGGCCA TTCTGGCTGA AGAAGTGGAG CGGGCGCGGC AAGAAGGCGG CGTCTGA
|
Protein sequence | MNFSRFGNKF TRHAGITQLM DDLNDGLRTP GAIMLGGGNP AHIPAMDDYF QQLCRDLLDQ GKLTDALCNY DGPQGKDVLL HSLSGLLREQ FGWEIGPQNI ALTNGSQSAF FYLFNLFAGQ TDDGQRRRVL FPLAPEYIGY ADSGLDEDMF VSVRPQIELL PAGQFKYHVD FEQLRITDDI GMICVSRPTN PTGNVLTDEE LLHLDALARE HQIPLVIDNA YGVPFPGIIF SDATPLWNPN IILCMSLSKL GLPGSRCGIV IGSEHVIEAL GNMNGIVSLA PGSIGPALAH EMIQRGDLLR LSNDVVRPFY RQRVEQTLAI IRRYLPPEVC LIHKPEGAIF LWLWFKDLPI TTEVLYQRLK QRGVLMVPGH YFFPGLEQEW PHAHQCLRMN YVPEPEKIEQ GVAILAEEVE RARQEGGV
|
| |