| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0028 |
|---|
| Symbol | |
|---|
| ID | 8118973 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 31185 |
|---|
| End bp | 32303 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644850409 |
|---|
| Product | uncharacterized peroxidase-related enzyme |
|---|
| Protein accession | YP_003002400 |
|---|
| Protein GI | 251787679 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2128] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain
[TIGR01926] uncharacterized peroxidase-related enzyme |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCAAT CAACATCCGA TATTTTGGAT ACGCTGGCGG AGATCGCCCC AAATTCACCG
CTGGCGCAGG CCAGAGCGAC GCGTGATGCC GCTACCCGGC ATACGCAAGG CAGCTATGAC
GCACTGTTCA GCCAGACGAC GGGTGACGCT CTGCCGCTGG CGTTGCGCTT TTTCATCGCC
GAACAGGTCA GCGGCTGGCA TCAGAACACA CGGCTACAGC AGTTTTACGC CCAACGGCTG
GCGGATTTTC CACCCCCTGC GCCCGGTGCG GCGCTGGACC GGGCGCTGGA ACATGCCGAG
CGTCTGGCCT ACCAGCCGGT GGCGGCGCAG CCAGAACAGT TGCAAACATT GCAACAGGCG
GGTTGGGCGG TGGATGATAT CGTCACCCTG TCGCAACTGG TGGCGTTTGT CAGCTTTCAA
AGCCGGTTGC TGCACGGCTA CCGGCTGCTG GCCGGTCACG CCGAAGAGCC GGCGCCCGCT
GCACCTGCCG CCGTCGCCGG GCGCTGGCAC ACCCAGCCGC TGACCCACAG CGGCAAAACC
GCCCCGGATG CGTTTACGCA GGGCGAACTG GGCTGGGAAC CGTGGGTTCC CGCCAAACCG
CTGGCGGCAT TCACCGCCGA CGAACAGGCG ATTCTGGCGC GCTTCGGCCA TACCGATTCC
GACTATTTCC GCCTGCTGGG CCGCAATCTG CCGGTGCTGG AACAACGCAC CCTCACCGAC
AAAGGCATTT TCTATACCTC CGGCGGCCTG CCGCGCAAAG ACCGGGAGCT GGCGGCCGCG
GTGGTCAGCA AGATCAACGG CTGTATTTAC TGTGCCTCGG TGCATGCCCG CAAGGCCAGC
CAGCTATCGA AACAGGACGA CGCGGTACAA CGCTTGCTCG ACGTGCCGCC GGGCGGCGAT
ATCGCTGCCG GACAGGACGC GCGCTGGCAG GCGATCATCG CCTTCGCCGC ACGGCTATCC
ACTACGCCGT CGCAGGTCAA CGCGCAGGAT CTGGCGCGGC TGCGCGAACA GGGGTTGGAC
ACGCTGGACA TTCTCGACCT GATTCAATCC ACCGCGTTTT TCGCCTGGGC CAACCGGCTG
ATGCTGACGC TGGGCGAACC GTTCTGGCCA CTGCGGTAA
|
|---|
| Protein sequence | MTQSTSDILD TLAEIAPNSP LAQARATRDA ATRHTQGSYD ALFSQTTGDA LPLALRFFIA
EQVSGWHQNT RLQQFYAQRL ADFPPPAPGA ALDRALEHAE RLAYQPVAAQ PEQLQTLQQA
GWAVDDIVTL SQLVAFVSFQ SRLLHGYRLL AGHAEEPAPA APAAVAGRWH TQPLTHSGKT
APDAFTQGEL GWEPWVPAKP LAAFTADEQA ILARFGHTDS DYFRLLGRNL PVLEQRTLTD
KGIFYTSGGL PRKDRELAAA VVSKINGCIY CASVHARKAS QLSKQDDAVQ RLLDVPPGGD
IAAGQDARWQ AIIAFAARLS TTPSQVNAQD LARLREQGLD TLDILDLIQS TAFFAWANRL
MLTLGEPFWP LR
|
|---|
| |