| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0011 |
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| Symbol | |
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| ID | 8118956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 13031 |
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| End bp | 14620 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644850393 |
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| Product | Sigma 54 interacting domain protein |
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| Protein accession | YP_003002384 |
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| Protein GI | 251787663 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG4650] Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGCA GAGTGATGAT CGGCGTGCTG GGCACGGCGT TGGATAAACG CGGGAAGCGG
CAAAATCGCT GGAATCGGTG GCGGCCAACA ATCGCCGCCT GCCAGCAACC GGATCTGCCG
ATTGACCGAC TGGAATTGCT CTATCAGCCA CGTAGTCTCG GGCTGGCGCA ACAGGTTCAG
GAAGATATAA GCCAGATATC GCCTTCCACC ACGGTGAATC TGCATGAGGT TGAACTCGCC
GACCCCTGGG ACTTCGAAGA GGTCTACACC ACGTTTCTCG ACTTCGCGGC GCACTACCCG
TTCGATACGG AAAACGAAGA ATATCTGGTA CATATTACGA CCGGCACGCA TGTGGTACAG
ATTTGCTGGT TTCTGCTGAC GGAAGCGCGA TACCTGCCGG CCCGGCTGCT GCAAACCAGC
CCGTCGGACC ATGACGACGC CACACCGTCT CCCGCCGGGC AGTACACCGT TATTGACCTC
GATCTTAGCC GTTACACCGC CATTACCAGC CGATTCCTGC GGGAACAACA AGCATCCGTC
TCATTTCTGA AAGCGGGGAT CGCCACCCGT AATGCAACGT TTAACCGCAT CATCGACCAA
ATTGAACGGG TTGCCCTGCG TTCTTCCGCG CCTATTTTGC TAACCGGCCC CACCGGTGCA
GGCAAATCTT TTCTGGCCAA CCGTATTTAT CAGCTCAAGG CGTCGCGCCA TCAGGTCAAT
GGAAAGTTTG TCGCCGTCAA TTGCGCCACA CTGCGCGGCG ATAACGCGAT GTCCACATTG
TTTGGTCATG TTCGCGGCGC ATTCACCGGA GCGCAGCAAT CACGGGCAGG GCTGTTGCGG
GAAGCCGACG GTGGAATCCT GTTTCTTGAT GAAATCGGTG AGTTGGGGCC GGACGAACAG
GCGATGCTGC TGAAGGCGAT AGAAGAAAAA CGCTTTCTGC CGTTTGGTTC CGATAAAGAA
GTCAGCAGCG ATTTTCAGTT GATTGCCGGC ACTCACCGGG ATATGCCGCA TTGGGTAGAG
GCCGGGTATT TTCGTGAAGA CCTGTACGCA CGCATCAATA TGTGGACTTT TCCGCTACCG
GGTCTGGCGC AACGTTGTGA AGATATCGAA CCTAATCTGG ACTTCGAGTT ACACCGTTTT
GCCCAACAGC AACAAATCCA GGTGCGGTTC GATAAAGAAG CGCGCCAGCG TTTTCTGGCC
TTTGCCTGTT CGGAGCACGC CAGCTGGCGG GGCAACTTTC GCGAACTGGG TGCCAGCGTA
CACCGCATGG CGACGCTATC CGAGCAAGGG CGCATTAATA CCGTGCTGGT AGATGAAGAA
ATTCAACGCC TTAAACAGCA ATGGCGCAGC ACAACCGCCA ATACGATATT GCCGGCCCAC
CTCGGTGAGC TGGATATCTT CGAGCAATGC CAGCTTGAGC GAGTGTTAGA GGTATGCCGA
CAAACCCACA GCCTGTCGGA AGCCGGGCGT ACACTATTTG CCGTTTCGCG CCGACAAAAA
AAACAGCCCA ACGACGCCGA CAGGCTACGT AAATATCTGG CCCGCTTTGG GTTGAGCTGG
GATGACGTGA AAAACACCGC ATCGATATAA
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| Protein sequence | MKRRVMIGVL GTALDKRGKR QNRWNRWRPT IAACQQPDLP IDRLELLYQP RSLGLAQQVQ
EDISQISPST TVNLHEVELA DPWDFEEVYT TFLDFAAHYP FDTENEEYLV HITTGTHVVQ
ICWFLLTEAR YLPARLLQTS PSDHDDATPS PAGQYTVIDL DLSRYTAITS RFLREQQASV
SFLKAGIATR NATFNRIIDQ IERVALRSSA PILLTGPTGA GKSFLANRIY QLKASRHQVN
GKFVAVNCAT LRGDNAMSTL FGHVRGAFTG AQQSRAGLLR EADGGILFLD EIGELGPDEQ
AMLLKAIEEK RFLPFGSDKE VSSDFQLIAG THRDMPHWVE AGYFREDLYA RINMWTFPLP
GLAQRCEDIE PNLDFELHRF AQQQQIQVRF DKEARQRFLA FACSEHASWR GNFRELGASV
HRMATLSEQG RINTVLVDEE IQRLKQQWRS TTANTILPAH LGELDIFEQC QLERVLEVCR
QTHSLSEAGR TLFAVSRRQK KQPNDADRLR KYLARFGLSW DDVKNTASI
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