Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | B21_03467 |
Symbol | yicJ |
ID | 8112615 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21 |
Kingdom | Bacteria |
Replicon accession | NC_012892 |
Strand | - |
Start bp | 3700101 |
End bp | 3701483 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644849639 |
Product | hypothetical protein |
Protein accession | YP_003001212 |
Protein GI | 251786908 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2211] Na+/melibiose symporter and related transporters |
TIGRFAM ID | [TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.333065 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGAGTG AAGTGTTGTC CGTTAAAGAG AAAATTGGTT ATGGCATGGG AGACGCCGCC AGCCACATTA TTTTCGATAA CGTAATGTTA TATATGATGT TCTTTTATAC CGATATTTTT GGCATTCCTG CCGGTTTTGT CGGAACCATG TTTTTGGTCG CTCGTGCACT GGATGCGATT TCCGATCCTT GCATGGGGTT GTTGGCCGAT CGAACGCGCT CTCGCAGGGG TAAATTTCGT CCGTGGGTAC TGTTTGGCGC ACTGCCATTC GGGATCGTCT GTGTACTGGC CTATAGCACG CCAGATCTCA GTATGAACGG CAAAATGATC TATGCAGCAA TTACTTACAC CCTACTTACC TTACTTTATA CCGTCGTCAA TATCCCTTAC TGCGCATTGG GTGGTGTAAT CACCAATGAC CCGACTCAGC GTATCTCGCT GCAATCCTGG CGTTTTGTGC TGGCGACCGC GGGAGGCATG CTTTCTACTG TTCTGATGAT GCCACTGGTT AATTTAATTG GCGGTGATAA TAAACCACTC GGTTTCCAGG GCGGTATCGC GGTCCTTTCC GTGGTGGCAT TCATGATGCT GGCATTTTGT TTCTTCACCA CTAAAGAACG CGTTGAAGCA CCACCTACAA CAACGTCTAT GCGGGAAGAT TTACGTGATA TCTGGCAAAA CGACCAGTGG CGGATTGTCG GTTTACTAAC CATTTTCAAT ATCCTGGCGG TGTGCGTACG CGGTGGGGCG ATGATGTATT ACGTCACATG GATTTTGGGC ACGCCGGAAG TGTTTGTCGC TTTTCTCACC ACTTATTGCG TGGGTAACCT GATTGGTTCC GCACTGGCAA AACCTCTGAC CGACTGGAAA TGTAAAGTCA CTATCTTCTG GTGGACGAAC GCCCTGCTGG CAGTGATTAG CCTCGCGATG TTCTTTGTTC CCATGCAGGC CAGCATCACT ATGTTTGTCT TCATCTTCGT GATTGGTGTG TTGCATCAAC TGGTGACACC TATCCAGTGG GTAATGATGT CCGATACCGT CGACTACGGC GAGTGGTGCA ATGGTAAACG CCTGACCGGG ATCAGTTTTG CTGGCACGCT GTTTGTGCTC AAACTGGGGT TGGCCTTCGG CGGCGCTCTT ATCGGCTGGA TGCTGGCTTA TGGCGGATAT GATGCGGCAG AAAAAGCGCA GAACAGCGCC ACGATTAGCA TCATTATTGC GCTATTCACG ATTGTTCCGG CGATCTGTTA TTTGCTGAGC GCGATTATCG CTAAACGCTA CTACTCACTC ACGACGCACA ATCTGAAAAC CGTTATGGAA CAGCTGGCTC AGGGTAAACG CCGTTGCCAG CAACAATTCA CCTCTCAAGA AGTGCAGAAC TAA
|
Protein sequence | MKSEVLSVKE KIGYGMGDAA SHIIFDNVML YMMFFYTDIF GIPAGFVGTM FLVARALDAI SDPCMGLLAD RTRSRRGKFR PWVLFGALPF GIVCVLAYST PDLSMNGKMI YAAITYTLLT LLYTVVNIPY CALGGVITND PTQRISLQSW RFVLATAGGM LSTVLMMPLV NLIGGDNKPL GFQGGIAVLS VVAFMMLAFC FFTTKERVEA PPTTTSMRED LRDIWQNDQW RIVGLLTIFN ILAVCVRGGA MMYYVTWILG TPEVFVAFLT TYCVGNLIGS ALAKPLTDWK CKVTIFWWTN ALLAVISLAM FFVPMQASIT MFVFIFVIGV LHQLVTPIQW VMMSDTVDYG EWCNGKRLTG ISFAGTLFVL KLGLAFGGAL IGWMLAYGGY DAAEKAQNSA TISIIIALFT IVPAICYLLS AIIAKRYYSL TTHNLKTVME QLAQGKRRCQ QQFTSQEVQN
|
| |