Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | B21_03428 |
Symbol | rfaF |
ID | 8115638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21 |
Kingdom | Bacteria |
Replicon accession | NC_012892 |
Strand | + |
Start bp | 3660984 |
End bp | 3662030 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644849601 |
Product | hypothetical protein |
Protein accession | YP_003001174 |
Protein GI | 251786870 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
TIGRFAM ID | [TIGR02195] lipopolysaccharide heptosyltransferase II |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000123646 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAC TGGTGATCGG CCCGTCTTGG GTTGGCGACA TGATGATGTC GCAAAGTCTC TATCGCACGC TCCAGGCGCG CTATCCCCAG GCGATAATCG ATGTGATGGC ACCGGCATGG TGCCGTCCAT TATTATCGCG GATGCCGGAA GTTAACGAAG CTATTCCTAT GCCTCTCGGT CACGGAGCGC TGGAAATCGG CGAACGCCGT AAACTGGGTC ATAGCCTGCG TGAAAAGCGC TACGACCGCG CCTACGTCTT ACCCAACTCC TTCAAATCTG CATTAGTGCC TTTCTTCGCG GGTATTCCTC ATCGCACCGG CTGGCGCGGC GAGATGCGCT ACGGTTTACT CAACGATGTA CGCGTGCTCG ATAAAGAAGC CTGGCCGCTA ATGGTGGAAC GCTATGTCGC GCTGGCCTAT GACAAAGGCG TGATGCGTAC CGCACAAGAT CTACCAAAAC CGTTGTTATG GCCGCAATTG CAGGTGAGCG AAGGTGAAAA ATCATATACC TGTAATCAAT TTTCGCTTTC ATCAGAACGT CCGATGATTG GTTTTTGCCC GGGGGCGGAG TTTGGTCCGG CAAAACGCTG GCCACATTAC CACTATGCTG AGCTGGCAAA GCAGCTGATT GATGAAGGTT ATCAGGTGGT TCTGTTTGGC TCGGCGAAAG ATCATGAGGC GGGCAATGAG ATTCTTGCCG CTTTGAATAC CGAGCAGCAG GCATGGTGTC GGAACCTGGC GGGGGAAACA CAGCTTGATC AAGCGGTTAT CCTGATTGCA GCCTGTAAAG CCATTGTCAC TAACGATTCT GGCCTGATGC ACGTTGCGGC GGCGCTCAAT CGTCCGCTGG TTGCCTTGTA TGGTCCGAGT AGCCCGGACT TCACACCGCC GCTATCCCAT AAAGCGCGCG TGATCCGTCT GATTACCGGC TATCACAAAG TGCGTAAAGG TGACGCTGCG GAGGGTTATC ACCAGAGCTT GATCGACATT ACTCCCCAGC GCGTACTGGA AGAACTCAAC GCGCTATTGT TACAAGAGGA AGTCTGA
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Protein sequence | MKILVIGPSW VGDMMMSQSL YRTLQARYPQ AIIDVMAPAW CRPLLSRMPE VNEAIPMPLG HGALEIGERR KLGHSLREKR YDRAYVLPNS FKSALVPFFA GIPHRTGWRG EMRYGLLNDV RVLDKEAWPL MVERYVALAY DKGVMRTAQD LPKPLLWPQL QVSEGEKSYT CNQFSLSSER PMIGFCPGAE FGPAKRWPHY HYAELAKQLI DEGYQVVLFG SAKDHEAGNE ILAALNTEQQ AWCRNLAGET QLDQAVILIA ACKAIVTNDS GLMHVAAALN RPLVALYGPS SPDFTPPLSH KARVIRLITG YHKVRKGDAA EGYHQSLIDI TPQRVLEELN ALLLQEEV
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