| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | B21_03427 |
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| Symbol | rfaD |
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| ID | 8115924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli BL21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012892 |
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| Strand | + |
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| Start bp | 3660042 |
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| End bp | 3660974 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644849600 |
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| Product | hypothetical protein |
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| Protein accession | YP_003001173 |
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| Protein GI | 251786869 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | [TIGR02197] ADP-L-glycero-D-manno-heptose-6-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000445441 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCATCG TTACCGGCGG CGCGGGCTTT ATCGGCAGCA ACATCGTTAA GGCCCTGAAT
GATAAAGGCA TCACCGATAT TCTGGTGGTG GACAACCTGA AAGACGGCAC CAAGTTTGTG
AACCTGGTGG ATCTGAATAT CGCAGACTAT ATGGATAAGG AAGACTTCCT GATCCAGATT
ATGGCTGGCG AAGAGTTCGG CGATGTCGAA GCGATTTTCC ACGAAGGCGC ATGCTCTTCC
ACCACCGAGT GGGATGGCAA GTATATGATG GATAACAACT ATCAATACTC CAAAGAGCTG
CTGCACTACT GTCTGGAGCG CGAAATCCCG TTCCTGTATG CATCTTCCGC GGCCACCTAC
GGCGGACGCA CCTCCGACTT TATTGAATCC CGCGAGTACG AAAAACCGTT GAACGTCTAC
GGTTACTCAA AATTCCTGTT TGATGAATAT GTTCGTCAAA TCCTGCCTGA AGCGAACTCG
CAGATTGTTG GCTTCCGCTA TTTCAACGTT TATGGACCGC GTGAAGGCCA TAAAGGCAGC
ATGGCGAGCG TCGCTTTCCA TCTCAACACC CAGCTTAACA ACGGTGAATC ACCGAAGCTG
TTTGAAGGTA GCGAGAACTT CAAACGCGAC TTCGTCTATG TGGGCGACGT GGCAGATGTA
AACCTGTGGT TCCTGGAAAA TGGCGTTTCC GGCATCTTCA ATCTCGGTAC TGGTCGTGCG
GAATCCTTCC AGGCTGTAGC TGATGCTACG CTGGCTTATC ACAAGAAAGG ACAGATCGAA
TACATTCCGT TCCCGGATAA ACTGAAAGGC CGCTATCAGG CGTTCACTCA GGCAGATCTG
ACAAATCTGC GCGCGGCGGG TTACGACAAA CCGTTCAAAA CCGTTGCTGA AGGTGTAACG
GAATACATGG CCTGGCTGAA TCGCGACGCA TAA
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| Protein sequence | MIIVTGGAGF IGSNIVKALN DKGITDILVV DNLKDGTKFV NLVDLNIADY MDKEDFLIQI
MAGEEFGDVE AIFHEGACSS TTEWDGKYMM DNNYQYSKEL LHYCLEREIP FLYASSAATY
GGRTSDFIES REYEKPLNVY GYSKFLFDEY VRQILPEANS QIVGFRYFNV YGPREGHKGS
MASVAFHLNT QLNNGESPKL FEGSENFKRD FVYVGDVADV NLWFLENGVS GIFNLGTGRA
ESFQAVADAT LAYHKKGQIE YIPFPDKLKG RYQAFTQADL TNLRAAGYDK PFKTVAEGVT
EYMAWLNRDA
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