| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | B21_03151 |
|---|
| Symbol | slyD |
|---|
| ID | 8116772 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012892 |
|---|
| Strand | - |
|---|
| Start bp | 3336718 |
|---|
| End bp | 3337308 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644849333 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003000906 |
|---|
| Protein GI | 251786602 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1047] FKBP-type peptidyl-prolyl cis-trans isomerases 2 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000420752 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTAG CAAAAGACCT GGTGGTCAGC CTGGCCTATC AGGTACGTAC AGAAGACGGT
GTGTTGGTTG ATGAGTCTCC GGTGAGTGCG CCGCTGGACT ACCTGCATGG TCACGGTTCC
CTGATCTCTG GCCTGGAAAC GGCGCTGGAA GGTCATGAAG TTGGCGACAA ATTTGATGTC
GCTGTTGGCG CGAACGACGC TTACGGTCAG TACGACGAAA ACCTGGTGCA ACGTGTTCCT
AAAGACGTAT TTATGGGCGT TGATGAACTG CAGGTAGGTA TGCGTTTCCT GGCTGAAACC
GACCAGGGTC CGGTACCGGT TGAAATCACT GCGGTTGAAG ACGATCACGT CGTGGTTGAT
GGTAACCACA TGCTGGCCGG TCAGAACCTG AAATTCAACG TTGAAGTTGT GGCGATTCGC
GAAGCGACTG AAGAAGAACT GGCTCATGGT CACGTTCACG GCGCGCACGA TCACCACCAC
GATCACGACC ACGACGGTTG CTGCGGCGGT CATGGCCACG ATCACGGTCA TGAACACGGT
GGTGAAGGCT GCTGTGGCGG TAAAGGCAAC GGCGGTTGCG GTTGCCACTA A
|
|---|
| Protein sequence | MKVAKDLVVS LAYQVRTEDG VLVDESPVSA PLDYLHGHGS LISGLETALE GHEVGDKFDV
AVGANDAYGQ YDENLVQRVP KDVFMGVDEL QVGMRFLAET DQGPVPVEIT AVEDDHVVVD
GNHMLAGQNL KFNVEVVAIR EATEEELAHG HVHGAHDHHH DHDHDGCCGG HGHDHGHEHG
GEGCCGGKGN GGCGCH
|
|---|
| |