Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | B21_03098 |
Symbol | rpsD |
ID | 8115240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21 |
Kingdom | Bacteria |
Replicon accession | NC_012892 |
Strand | - |
Start bp | 3301435 |
End bp | 3302055 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644849281 |
Product | hypothetical protein |
Protein accession | YP_003000854 |
Protein GI | 251786550 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0522] Ribosomal protein S4 and related proteins |
TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.14617 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAGAT ATTTGGGTCC TAAGCTCAAG CTGAGCCGTC GTGAGGGCAC CGACTTATTC CTTAAGTCTG GCGTTCGCGC GATCGATACC AAGTGTAAAA TTGAACAAGC TCCTGGCCAG CACGGTGCGC GTAAACCGCG TCTGTCTGAC TATGGTGTGC AGTTGCGTGA AAAGCAAAAA GTTCGCCGTA TCTATGGTGT GCTGGAGCGT CAGTTCCGTA ACTACTACAA AGAAGCAGCA CGTCTGAAAG GCAACACCGG TGAAAACCTG TTGGCTCTGC TGGAAGGTCG TCTGGACAAC GTTGTATACC GTATGGGCTT CGGTGCCACT CGTGCAGAAG CACGTCAGCT GGTTAGCCAT AAAGCAATTA TGGTAAACGG TCGTGTTGTT AACATCGCTT CTTATCAGGT TAGTCCGAAT GACGTTGTAA GCATTCGTGA GAAAGCGAAG AAGCAGTCTC GCGTGAAAGC CGCTCTGGAG CTGGCTGAGC AGCGTGAAAA GCCAACCTGG CTGGAAGTTG ATGCTGGCAA GATGGAAGGT ACGTTTAAGC GTAAGCCGGA GCGTTCTGAT CTGTCTGCGG ACATTAACGA ACACCTGATC GTCGAGCTTT ACTCCAAGTA A
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Protein sequence | MARYLGPKLK LSRREGTDLF LKSGVRAIDT KCKIEQAPGQ HGARKPRLSD YGVQLREKQK VRRIYGVLER QFRNYYKEAA RLKGNTGENL LALLEGRLDN VVYRMGFGAT RAEARQLVSH KAIMVNGRVV NIASYQVSPN DVVSIREKAK KQSRVKAALE LAEQREKPTW LEVDAGKMEG TFKRKPERSD LSADINEHLI VELYSK
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