| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | B21_03087 |
|---|
| Symbol | smf |
|---|
| ID | 8116774 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012892 |
|---|
| Strand | - |
|---|
| Start bp | 3292816 |
|---|
| End bp | 3293940 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644849270 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003000843 |
|---|
| Protein GI | 251786539 |
|---|
| COG category | [L] Replication, recombination and repair
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake |
|---|
| TIGRFAM ID | [TIGR00732] DNA protecting protein DprA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.531925 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGATA CAGAAATTTG GCTGCGTTTA ATGAGTATCA GCAGCTTGTA CGGCGATGAT
ATGGTCCGTA TCGCTCACTG GGTGGCAAAA CAGTCGCATA TTGATGCGGT TGTATTGCAG
CAAACAGGGC TTACATTGCG GCAGGCACAA CGCTTTCTTT CATTTCCACG AAAGAGTATC
GAAAGCTCAC TTTGTTGGTT GGAGCAACCC AACCATCATT TAATTCCTGC GGACAGCGAA
TTTTATCCTC CTCAACTTCT GGCGACGACA GATTACCCCG GCGCACTGTT TGTTGAAGGA
GAACTGCACG CGCTGCATTC ATTTCAGCTT GCCGTAGTGG GGAGTCGGGC GCATTCATGG
TATGGCGAGC GATGGGGACG ATTATTTTGC GAAACTCTGG CGACGCGTGG AGTGACAATT
ACGAGTGGAC TGGCGCGTGG AATCGATGGT GTAGCGCATA AAGCAGCCTT ACAGGTAAAT
GGCGTCAGCA TTGCTGTATT GGGGAATGGA CTTAATACCA TTCATCCCCG CCGTCATGCC
CGACTGGCTG CCAGTCTGCT TGAACAGGGG GGCGCTCTCG TCTCGGAATT TCCCCTCGAT
GTTCCACCCC TTGCTTACAA TTTCCCACGA AGAAATCGCA TTATCAGTGG TCTAAGTAAA
GGTGTACTGG TGGTGGAAGC GGCTTTGCGT AGTGGTTCGC TGGTGACAGC ACGTTGTGCG
CTTGAGCAGG GGCGAGAAGT TTTTGCCTTG CCAGGTCCAA TAGGGAATCC GGGAAGCGAA
GGGCCTCACT GGTTAATAAA ACAAGGTGCG ATTCTTGTGA CGGAACCGGA AGAAATTCTG
GAAAACTTGC AATTTGGATT GCACTGGTTG CCAGACGCCC CTGAAAATTC ATTTTATTCA
CCAGATCAGC AAGACGTGGC ATTGCCATTT CCTGAGCTCC TGGCTAACGT AGGAGATGAG
GTAACACCTG TTGACGTCGT CGCTGAACGT GCCGGCCAAC CTGTGCCAGA GGTAGTTACT
CAACTACTCG AACTGGAGTT AGCAGGATGG ATCGCAGCTG TACCCGGCGG CTATGTCCGA
TTGAGGAGGG CATGCCATGT TCGACGTACT AATGTATTTG TTTGA
|
|---|
| Protein sequence | MVDTEIWLRL MSISSLYGDD MVRIAHWVAK QSHIDAVVLQ QTGLTLRQAQ RFLSFPRKSI
ESSLCWLEQP NHHLIPADSE FYPPQLLATT DYPGALFVEG ELHALHSFQL AVVGSRAHSW
YGERWGRLFC ETLATRGVTI TSGLARGIDG VAHKAALQVN GVSIAVLGNG LNTIHPRRHA
RLAASLLEQG GALVSEFPLD VPPLAYNFPR RNRIISGLSK GVLVVEAALR SGSLVTARCA
LEQGREVFAL PGPIGNPGSE GPHWLIKQGA ILVTEPEEIL ENLQFGLHWL PDAPENSFYS
PDQQDVALPF PELLANVGDE VTPVDVVAER AGQPVPEVVT QLLELELAGW IAAVPGGYVR
LRRACHVRRT NVFV
|
|---|
| |