| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | B21_02480 |
|---|
| Symbol | ygaF |
|---|
| ID | 8116134 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012892 |
|---|
| Strand | + |
|---|
| Start bp | 2628977 |
|---|
| End bp | 2630245 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644848680 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003000253 |
|---|
| Protein GI | 251785949 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0579] Predicted dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATGATT TTGTGATTAT TGGCGGTGGC ATCATCGGCA TGTCGACCGC CATGCAACTG
ATTGATGTCT ACCCGGACGC CCGCATTGCG TTGCTGGAAA AAGAGTCCGG CCCGGCCTGT
CACCAGACGG GCCACAACAG CGGCGTGATC CATGCCGGGG TTTATTACAC GCCCGGTAGC
CTGAAGGCAC AGTTTTGCCT GGCGGGAAAC CGCGCCACTA AAGCCTTTTG CGATCAAAAC
GGCATTCGCT ATGACAACTG CGGCAAGATG CTGGTCGCCA CCTCTGAACT CGAAATGGAA
CGGATGCGCG CGTTGTGGGA ACGCACGGCG GCAAACGGTA TCGAGCGCGA GTGGTTAAAC
GCCGATGAAC TGCGCGAGCG CGAACCGAAT ATCACCGGGC TTGGCGGTAT TTTTGTGCCG
TCCAGCGGCA TTGTCAGCTA CCGCGAAGTA ACGGCGGCGA TGGCAAAAAT TTTCCAGGCC
AGAGGCGGCG AGATTATCTA TAACGCCGAA GTCAGCGGCC TCAGTGAGCA TAAAAACGGC
GTGGTGATAC GTACCCGCCA GGGCGGCGAA TATGAAGCAT CGACGCTGAT TAGCTGTTCC
GGGCTGATGG CTGACCGGCT GGTGAAAATG CTCGGACTCG AACCGGGCTT TATCATCTGC
CCGTTCCGTG GTGAGTATTT CCGCCTTGCG CCGGAGCATA ACCAGATTGT TAACCACCTG
ATTTACCCCA TTCCCGACCC CGCGATGCCA TTTTTGGGCG TGCATCTCAC CCGAATGATC
GATGGCAGCG TGACCGTCGG GCCAAACGCG GTGCTGGCTT TTAAACGCGA AGGCTACCAC
AAGCGCGACT TCTCGTTTAG CGACACGCTG GAAATTTTGG GCTCGTCGGG GATTCGCCGG
GTGCTGCAAA ACCATCTACG CTCAGGACTG GGCGAGATGA AAAACTCGCT GTGCAAAAGC
GGCTATCTGC GGCTGGTGCA AAAGTATTGT CCCCGGCTTT CGTTAAGCGA TCTCCAGCCC
TGGCCCGCCG GTGTGCGGGC GCAGGCGGTA TCGCCGGACG GCAAGCTGAT TGACGATTTT
CTGTTTGTCA CCACCCCGCG CACGATCCAC ACCTGCAATG CGCCCTCCCC GGCAGCGACA
TCAGCAATTC CTATTGGTGC GTATATTGTC AGCAAGGTAC AAACGCTGTT GGCAAGCCAG
AGTAACCCCG GACGCACGCT GCGAGCGGCA CGTAGTGTGG ATGCCTTACA CGCCGCATTT
AATCAATAA
|
|---|
| Protein sequence | MYDFVIIGGG IIGMSTAMQL IDVYPDARIA LLEKESGPAC HQTGHNSGVI HAGVYYTPGS
LKAQFCLAGN RATKAFCDQN GIRYDNCGKM LVATSELEME RMRALWERTA ANGIEREWLN
ADELREREPN ITGLGGIFVP SSGIVSYREV TAAMAKIFQA RGGEIIYNAE VSGLSEHKNG
VVIRTRQGGE YEASTLISCS GLMADRLVKM LGLEPGFIIC PFRGEYFRLA PEHNQIVNHL
IYPIPDPAMP FLGVHLTRMI DGSVTVGPNA VLAFKREGYH KRDFSFSDTL EILGSSGIRR
VLQNHLRSGL GEMKNSLCKS GYLRLVQKYC PRLSLSDLQP WPAGVRAQAV SPDGKLIDDF
LFVTTPRTIH TCNAPSPAAT SAIPIGAYIV SKVQTLLASQ SNPGRTLRAA RSVDALHAAF
NQ
|
|---|
| |