Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | B21_01590 |
Symbol | rnfD |
ID | 8113892 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21 |
Kingdom | Bacteria |
Replicon accession | NC_012892 |
Strand | + |
Start bp | 1653650 |
End bp | 1654708 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644847819 |
Product | hypothetical protein |
Protein accession | YP_002999392 |
Protein GI | 251785088 |
COG category | [C] Energy production and conversion |
COG ID | [COG4658] Predicted NADH:ubiquinone oxidoreductase, subunit RnfD |
TIGRFAM ID | [TIGR01946] electron transport complex, RnfABCDGE type, D subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0216636 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTATTCA GAATAGCTAG CTCCCCTTAT ACCCATAACC AGCGCCAGAC ATCGCGCATT ATGCTGTTGG TGTTGCTCGC AGCCGTGCCA GGAATCGCAG CGCAACTGTG GTTTTTTGGT TGGGGTACTC TCGTTCAGAT CCTGTTGGCA TCGGTTAGTG CTCTGTTAGC CGAAGCTCTC GTACTCAAAC TACGCAAGCA GTCGGTAGCC GCAACGTTGA AAGATAACTC AGCATTGCTG ACAGGCTTAT TGCTGGCGGT AAGTATTCCC CCCCTCGCGC CATGGTGGAT GGTCGTGCTG GGTACGGTGT TTGCGGTGAT CATCGCTAAA CAGTTGTATG GCGGTCTGGG GCAAAACCCG TTTAATCCGG CAATGATTGG TTATGTGGTC TTACTGATCT CCTTCCCTGT GCAGATGACC AGCTGGTTAC CGCCACATGA AATTGCGGTC AACATCCCTG GTTTTATCGA CGCCATACAG GTTATTTTCA GCGGACATAC CGCCAGTGGT GGTGATATGA ACACACTACG CTTAGGTATT GATGGCATTA GTCAGGCGAC ACCGCTGGAT ACATTTAAAA CCTCTGTCCG TGCCGGTCAT TCGGTTGAAC AGATTATGCA ATATCCGATC TACAGCGGTA TTCTGGCGGG CGCTGGTTGG CAATGGGTAA ATCTCGCCTG GCTGGCTGGC GGCCTGTGGT TGCTATGGCA GAAAGCGATT CGCTGGCATA TTCCCCTCAG CTTCTTAGTA ACGCTGGCGT TATGCGCAAC GTTGGGCTGG TTGTTCTCAC CAGAAACACT GGCAGCACCG CAAATTCATC TGCTGTCTGG TGCGACCATG CTCGGCGCAT TCTTTATTTT GACTGACCCG GTTACCGCTT CTACGACCAA TCGTGGTCGT CTTATTTTCG GCGCGCTGGC GGGCTTATTA GTCTGGTTGA TCCGCAGTTT CGGCGGCTAT CCTGACGGCG TGGCTTTTGC CGTCCTGCTG GCGAACATCA CGGTTCCTCT GATCGATTAC TACACGCGTC CGCGCGTCTA CGGCCATCGC AAAGGGTAA
|
Protein sequence | MVFRIASSPY THNQRQTSRI MLLVLLAAVP GIAAQLWFFG WGTLVQILLA SVSALLAEAL VLKLRKQSVA ATLKDNSALL TGLLLAVSIP PLAPWWMVVL GTVFAVIIAK QLYGGLGQNP FNPAMIGYVV LLISFPVQMT SWLPPHEIAV NIPGFIDAIQ VIFSGHTASG GDMNTLRLGI DGISQATPLD TFKTSVRAGH SVEQIMQYPI YSGILAGAGW QWVNLAWLAG GLWLLWQKAI RWHIPLSFLV TLALCATLGW LFSPETLAAP QIHLLSGATM LGAFFILTDP VTASTTNRGR LIFGALAGLL VWLIRSFGGY PDGVAFAVLL ANITVPLIDY YTRPRVYGHR KG
|
| |