| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | B21_00889 |
|---|
| Symbol | macA |
|---|
| ID | 8112759 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012892 |
|---|
| Strand | + |
|---|
| Start bp | 923349 |
|---|
| End bp | 924464 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644847151 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002998724 |
|---|
| Protein GI | 251784420 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0845] Membrane-fusion protein |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGC GGAAAACCGT GAAGAAGCGT TACGTTATTG CGCTGGTGAT AGTCATCGCC
GGACTGATTA CGTTATGGAG AATTCTTAAC GCACCCGTGC CGACTTATCA GACACTGATT
GTGCGCCCCG GTGATTTACA GCAAAGCGTG CTGGCGACCG GAAAGCTGGA CGCGCTGCGT
AAGGTTGACG TGGGCGCGCA GGTCAGCGGT CAGTTGAAAA CGCTGTCGGT GGCGATTGGC
GATAAAGTAA AAAAAGACCA GCTTTTAGGG GTCATTGATC CTGAACAGGC TGAAAACCAG
ATCAAGGAGG TCGAAGCAAC GCTGATGGAG CTACGCGCGC AGCGGCAGCA GGCGGAAGCG
GAGCTGAAAC TGGCGCGGGT GACGTATTCC CGTCAGCAAC GTCTGGCACA AACGAAGGCT
GTTTCACAGC AGGATCTCGA CACCGCCGCG ACGGAGATGG CTGTGAAACA GGCGCAAATT
GGCACCATTG ACGCGCAAAT CAAGCGCAAT CAGGCTTCTC TCGATACGGC TAAAACCAAT
CTCGATTACA CTCGCATCGT TGCCCCGATG GCCGGGGAAG TCACGCAAAT CACCACTCTG
CAAGGCCAGA CGGTGATTGC CGCACAACAA GCACCGAACA TTCTGACGCT GGCAGATATG
AGCACCATGC TGGTAAAAGC GCAGGTTTCT GAAGCGGATG TAATCCACCT GAAGCCGGGG
CAAAAAGCCT GGTTTACGGT GCTTGGCGAT CCACTGACGC GCTACGAGGG GCAAATCAAG
GATGTACTAC CGACGCCGGA AAAGGTTAAC GACGCTATTT TCTATTACGC CCGTTTTGAA
GTCCCCAACC CCAATGGTTT GCTGCGGCTG GATATGACTG CGCAAGTGCA TATTCAGCTC
ACCGATGTGA AAAATGTGCT GACGATCCCT CTGTCGGCGT TAGGCGATCC GGTTGGCGAT
AATCGTTATA AAGTCAAATT GTTGCGTAAT GGTGAAACAC GCGAGCGTGA AGTGACGATT
GGCGCACGTA ACGATACCGA TGTTGAGATT GTCAAAGGGC TTGAAGCGGG CGATGAAGTG
GTGATTGGTG AGGCCAAACC AGGAGCTGCA CAATGA
|
|---|
| Protein sequence | MKKRKTVKKR YVIALVIVIA GLITLWRILN APVPTYQTLI VRPGDLQQSV LATGKLDALR
KVDVGAQVSG QLKTLSVAIG DKVKKDQLLG VIDPEQAENQ IKEVEATLME LRAQRQQAEA
ELKLARVTYS RQQRLAQTKA VSQQDLDTAA TEMAVKQAQI GTIDAQIKRN QASLDTAKTN
LDYTRIVAPM AGEVTQITTL QGQTVIAAQQ APNILTLADM STMLVKAQVS EADVIHLKPG
QKAWFTVLGD PLTRYEGQIK DVLPTPEKVN DAIFYYARFE VPNPNGLLRL DMTAQVHIQL
TDVKNVLTIP LSALGDPVGD NRYKVKLLRN GETREREVTI GARNDTDVEI VKGLEAGDEV
VIGEAKPGAA Q
|
|---|
| |