Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | B21_00119 |
Symbol | speE |
ID | 8115140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21 |
Kingdom | Bacteria |
Replicon accession | NC_012892 |
Strand | - |
Start bp | 138403 |
End bp | 139269 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644846412 |
Product | hypothetical protein |
Protein accession | YP_002997985 |
Protein GI | 251783681 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0421] Spermidine synthase |
TIGRFAM ID | [TIGR00417] spermidine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00179737 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGAAA AAAAACAGTG GCATGAAACG CTACACGACC AGTTTGGGCA GTACTTTGCG GTAGATAACG TTCTGTATCA TGAAAAGACC GATCACCAGG ATCTGATCAT TTTTGAGAAC GCTGCATTTG GTCGCGTAAT GGCGCTGGAT GGCGTAGTAC AAACCACCGA GCGCGACGAG TTTATCTATC ATGAGATGAT GACCCATGTT CCGCTACTGG CCCATGGTCA CGCGAAACAT GTGCTGATTA TCGGCGGCGG CGACGGTGCC ATGCTGCGTG AAGTAACCCG ACATAAAAAC GTTGAGTCAA TCACGATGGT GGAAATCGAT GCGGGTGTCG TATCGTTCTG CCGTCAGTAT CTACCCAACC ATAACGCCGG TAGCTACGAC GATCCGCGCT TTAAGCTGGT GATCGACGAT GGCGTCAATT TCGTTAATCA AACCAGCCAG ACCTTTGATG TCATTATCTC CGACTGCACC GATCCTATCG GTCCCGGCGA AAGCCTTTTC ACTTCGGCAT TTTATGAAGG CTGCAAACGT TGCCTGAATC CTGGCGGTAT CTTCGTCGCA CAAAACGGCG TCTGCTTTTT ACAGCAGGAA GAAGCCATCG ACAGCCATCG CAAACTCAGC CATTACTTCA GCGACGTTGG CTTTTATCAG GCGGCGATCC CGACCTATTA CGGCGGTATC ATGACTTTTG CATGGGCGAC AGATAACGAC GCCTTACGCC ATCTCTCAAC CGAAATTATT CAGGCGCGTT TTCTCGCCTC TGGCCTGAAA TGCCGTTATT ACAATCCGGC AATCCATACG GCAGCTTTTG CCTTACCTCA GTATCTGCAA GACGCACTGG CTTCACAGCC GTCCTAA
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Protein sequence | MAEKKQWHET LHDQFGQYFA VDNVLYHEKT DHQDLIIFEN AAFGRVMALD GVVQTTERDE FIYHEMMTHV PLLAHGHAKH VLIIGGGDGA MLREVTRHKN VESITMVEID AGVVSFCRQY LPNHNAGSYD DPRFKLVIDD GVNFVNQTSQ TFDVIISDCT DPIGPGESLF TSAFYEGCKR CLNPGGIFVA QNGVCFLQQE EAIDSHRKLS HYFSDVGFYQ AAIPTYYGGI MTFAWATDND ALRHLSTEII QARFLASGLK CRYYNPAIHT AAFALPQYLQ DALASQPS
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