| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_4012 |
|---|
| Symbol | |
|---|
| ID | 8087402 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 4653522 |
|---|
| End bp | 4654193 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644838107 |
|---|
| Product | Curli production assembly/transport component CsgG |
|---|
| Protein accession | YP_002989586 |
|---|
| Protein GI | 242241405 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1462] Uncharacterized protein involved in formation of curli polymers |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.767014 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAA AGGTCGTTTT TTGTTCTATG GTCATTGCCG CCACCCTGTT GGGCGGATGT
GCCACAGAAT CTTCACGTAC CGTGGAAACT CCTAAAGTTG CGTCCTACAG CACGCCTTAT
CAAGGCGTCC GCAGCCCCAT TTCGGTAGGG AAATTTGAAA ATCGCTCCAA CTATATGAAT
GGTATTTTCT CTGATGGTGT AGACCGTTTG GGAAATCAAG CAAAAACCAT TCTTGTTAGC
CACTTACAGC AAACTGGCCG CTTTAATGTG TTGGATCGCA CCAACATGGA CGAGTTGAAA
ACAGAAGCAG GTATTAAAGG TCAGACTCAG ACCTTAAAAG GCGCAAATTA CGTTGTGACA
GGGGATGTAA CTGAGTTTGG TCGTAAGGAA GTTGGCGATC ATCAACTGTG GGGCATTCTT
GGCAGAGGCA AATCACAGAT CGCCTACGCT AAGACCACAT TGAATATCGT AAATGTCCAG
ACATCTGAAG TCGTGTATTC CGTGCAGGGG GCTGGTGAAT ATGCGTTGTC CAATCGTGAG
ATTGTCGGGT TTGGCGGTAC AGCCAGTTAT GACTCGACGC TGAATGGCAA AGTACTGGAT
TTGGCGATTC GTGAAGCGGT TAACAACCTG GTTGCAGGTA TTGAGAGCGG CGCATGGCGT
CCATCAAATT AA
|
|---|
| Protein sequence | MNKKVVFCSM VIAATLLGGC ATESSRTVET PKVASYSTPY QGVRSPISVG KFENRSNYMN
GIFSDGVDRL GNQAKTILVS HLQQTGRFNV LDRTNMDELK TEAGIKGQTQ TLKGANYVVT
GDVTEFGRKE VGDHQLWGIL GRGKSQIAYA KTTLNIVNVQ TSEVVYSVQG AGEYALSNRE
IVGFGGTASY DSTLNGKVLD LAIREAVNNL VAGIESGAWR PSN
|
|---|
| |