Gene Dd703_3997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3997 
Symbol 
ID8087387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp4635175 
End bp4636545 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content55% 
IMG OID644838092 
ProductUDP-N-acetylglucosamine pyrophosphorylase 
Protein accessionYP_002989571 
Protein GI242241390 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1207] N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) 
TIGRFAM ID[TIGR01173] UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAACA GCGCAATGAG CGTGGTGATT CTTGCCGCCG GCAAGGGTAC ACGCATGTAT 
TCCGACCTTC CTAAAGTTAT TCATCCACTT GCCGGTAAGC CCATGGTTCG ACATGTGATT
GATGCCGCCA TGCAGGTGGG GGCGCAGCGC GTTCATTTGG TTTACGGCCA CGGCGGCGAT
CAGCTGCGGG AGGCATTGGG CGATACCGGG GTTAACTGGG TTATACAGTC TGAGCAACTG
GGTACGGGGC ATGCAGTTCA GCAGGCGGCG GCCGGTTTTG CTGACGATGA GGACATCCTG
ATTCTGTACG GCGATGTGCC GTTGATCTCT CCGGCGACAT TATTGCGTCT GGTTGACGCC
AAACCGGAAG GGGGTATTGG CCTGCTGACG GTGGAATTGG ATGATCCGGC AGGATATGGC
CGTATCGTTC GGGAAAACGG TGAAATTGTC GGGATTGTTG AACATAAGGA CGCCAGCGAG
GAGCAGCGCC GGATCAAGGA AATCAATACC GGTATTCTGG TCGCCGGCGG TTGCGATTTG
AAGCGCTGGT TGGGCCGGTT AAGCAATAAC AATGTGCAGG GCGAATACTA TCTCACCGAT
ATCATTGCGA TGGCTTATCA GGAAGGTCGT CGCGTGGCAG CAGTTCATCC GGCGCGTTTG
AGCGAAGTAG AAGGCGTCAA TAATCGGTTG CAACTGGCTG CGCTGGAGCG TGTCTTTCAG
CATGAACAGG CAGAACGTCT ACTGCTTGCC GGCGTAATGT TGCTTGATCC TTCTCGTTTC
GATTTACGCG GCGAGTTGCA GCACGGTCGG GATGTGACTA TCGACGCCAA TGTCATACTG
GAAGGTCGGG TAACGCTTGG CGATCGGGTG AAAATCGGTG CGGGTTGCGT GATTCGCGAC
AGCGTGATTG GCAGTGATTG CGAGATTAGC CCTTATACTG TGGTGGAACA GGCTGAGCTG
GCGGCGCAAT GCACTATCGG CCCGTTTGCC CGTTTGCGTC CAGGGGCTGA ACTGGGCGAG
GGCGCGCATG TCGGCAATTT TGTGGAAATG AAAAAAGCGC GTCTGGGCAA AGGTTCCAAA
GCTGGACATT TGACCTACCT TGGCGATGCG GAAATTGGCG CCGGGGTGAA CATTGGCGCA
GGCACTATCA CCTGTAACTA TGATGGCGCC AATAAGCATA AAACCGTGAT TGGCGATGAT
GTGTTTGTTG GCTCCGATAC CCAACTGGTG GCGCCGGTGA CGGTGGCCAA CGGCGCCACT
ATTGGCGCAG GAACGACAGT GACCCGCAAT GTCGGTGAAA ATGAACTGGT CATCAGCCGC
GTCAAACAAA CACATTTCAC GGGCTGGCAG CGCCCGGTGA AGAAAAAATA G
 
Protein sequence
MSNSAMSVVI LAAGKGTRMY SDLPKVIHPL AGKPMVRHVI DAAMQVGAQR VHLVYGHGGD 
QLREALGDTG VNWVIQSEQL GTGHAVQQAA AGFADDEDIL ILYGDVPLIS PATLLRLVDA
KPEGGIGLLT VELDDPAGYG RIVRENGEIV GIVEHKDASE EQRRIKEINT GILVAGGCDL
KRWLGRLSNN NVQGEYYLTD IIAMAYQEGR RVAAVHPARL SEVEGVNNRL QLAALERVFQ
HEQAERLLLA GVMLLDPSRF DLRGELQHGR DVTIDANVIL EGRVTLGDRV KIGAGCVIRD
SVIGSDCEIS PYTVVEQAEL AAQCTIGPFA RLRPGAELGE GAHVGNFVEM KKARLGKGSK
AGHLTYLGDA EIGAGVNIGA GTITCNYDGA NKHKTVIGDD VFVGSDTQLV APVTVANGAT
IGAGTTVTRN VGENELVISR VKQTHFTGWQ RPVKKK