Gene Dd703_3984 details

Gene Information

• Locus tag: Dd703_3984
• ID: 8087374
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya dadantii Ech703
• Kingdom: Bacteria
• Replicon accession: NC_012880
• Strand: +
• Start bp: 4621940
• End bp: 4623829
• Gene Length: 1890 bp
• Protein Length: 629 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 644838080
• Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
• Protein accession: YP_002989559
• Protein GI: 242241378
• COG category: [D] Cell cycle control, cell division, chromosome partitioning
• COG ID: [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division
• TIGRFAM ID: [TIGR00136] glucose-inhibited division protein A

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTTATC CGGATCCTTT TGACGTCATC GTGATCGGCG GTGGCCATGC AGGTACCGAA 
GCCGCTATGG CTTCCGCCCG TATGGGACGT CAAACCCTCC TGTTAACCCA CAATATTGAT 
ACGCTGGGGC AAATGTCCTG CAACCCGGCG ATCGGCGGTA TCGGAAAGGG ACACCTGGTA 
AAAGAAATCG ATGCCATGGG CGGCCTGATG GCGCGCGCCA TCGACAGGGG CGGGATTCAG 
TTTAGGATAC TAAACTCCAG CAAAGGGCCA GCCGTTCGCG CCACCCGCGC CCAAGCGGAT 
AGGGTGCTTT ATCGCCAGGC AGTACGTACA GCACTGGAGA ACCAGCCTAA TCTGATGATC 
TTCCAGCAGG CTGTCGATGA TCTGATCGTG GAAAACGATC GTGTGGTGGG CGTAGTGACC 
CAGATGGGGT TGAAATTTCG CGCCAGAACC GTCGTGCTGA CGGTCGGTAC TTTTCTTGAC 
GGTAAGATCC ATATTGGTTT GGACAACTAC AGCGGCGGTC GCGCCGGCGA TCCTCCATCG 
GTTGCCCTAT CACGTCGTTT GAGAGAACTG CCGCTGCGCG TAGGCCGCCT CAAAACCGGT 
ACTCCTCCGC GTATTGATGC GCGTACTATC GATTTCAGCG TACTGACCCA ACAGCACGGC 
GATAATCCAA TGCCGGTGTT CTCCTTTCTG GGGGATGCCA GCCAGCATCC GGCGCAAATG 
CCTTGTTACA TCACGCATAC CAATGAACAT ACTCACGAAG TGATTCGTAA TAATCTGGAT 
CGCAGCCCAA TGTACGCCGG TGTTATTGAA GGTATCGGGC CACGTTATTG CCCTTCAATC 
GAGGATAAGG TCATGCGGTT TGCCGACCGC AATGCGCATC AGATCTTTCT TGAACCTGAA 
GGGCTGACCA GCAACGAGAT TTATCCGAAC GGTATTTCCA CCAGCCTCCC GTTTGATGTT 
CAGTGGCAGA TTGTCCGTTC TATGCAGGGA ATGGAAAACG CCAGGATCGT TCGCCCTGGG 
TATGCGATCG AGTATGACTA TTTCGATCCG CGTGATTTGA AACAAACGCT GGAAAGCAAA 
TATATCGCCG GCCTGTTTTT CGCCGGGCAG ATTAACGGCA CTACCGGCTA CGAAGAGGCC 
GCTGCCCAGG GGATGCTTGC CGGCCTGAAC GCCGCACGTT TGGCATTCGA TCAAGAGGGA 
TGGACGCCGC GTCGCGATCA GGCGTATTTG GGGGTTCTCG TCGACGATCT CTGTACGTTG 
GGAACACGCG AGCCGTATCG CATGTTTACT TCACGAGCGG AATACCGGTT GATGCTCAGG 
GAAGATAACG CCGATCTTCG CCTGACTGAA ATTGGACGAC AGCTGGGGAT GGTGGACGAT 
GAGCGTTGGG CTCGTTTCAA CGAGAAATTG GAAAACATCG AGAAAGAGCG TCAGCGATTG 
CGTGGAATAT TCGTCCATCC GCAGTCCGGG CAGATCGAGC AGGTCAATGT GTTGCTGAAA 
ACGCCGTTGT CCCGTGAGGC CAGCGGCGAA GATTTACTGC GTCGCCCTGA AATCGACTAT 
GCAATGCTGA CCCGCTTACC GATGTTTTCA CCCGCACTTG TTGACGCCCA GGCGGCTGAG 
CAGGTGGAGA TTCAGGTCAA GTACGAGGGG TATATCGCCC GGCAGCAGGA TGAGATCGAT 
AAACAGTCAC GGAATGAAAA TACTCTGTTG CCGGCCGATC TTGATTATCG ACAGGTAAGT 
GGATTATCCA ACGAAGTGAT CGCCAAGTTG AACGACCATA AACCAAGTTC TATTGGTCAG 
GCATCCCGGA TATCGGGCAT CACGCCTGCA GCAATCTCCA TTTTGCTGGT GTGGCTCAAA 
AAACAGGGTT TGCTGCGTCG CAGCGCCTGA 

 

Protein sequence

MFYPDPFDVI VIGGGHAGTE AAMASARMGR QTLLLTHNID TLGQMSCNPA IGGIGKGHLV 
KEIDAMGGLM ARAIDRGGIQ FRILNSSKGP AVRATRAQAD RVLYRQAVRT ALENQPNLMI 
FQQAVDDLIV ENDRVVGVVT QMGLKFRART VVLTVGTFLD GKIHIGLDNY SGGRAGDPPS 
VALSRRLREL PLRVGRLKTG TPPRIDARTI DFSVLTQQHG DNPMPVFSFL GDASQHPAQM 
PCYITHTNEH THEVIRNNLD RSPMYAGVIE GIGPRYCPSI EDKVMRFADR NAHQIFLEPE 
GLTSNEIYPN GISTSLPFDV QWQIVRSMQG MENARIVRPG YAIEYDYFDP RDLKQTLESK 
YIAGLFFAGQ INGTTGYEEA AAQGMLAGLN AARLAFDQEG WTPRRDQAYL GVLVDDLCTL 
GTREPYRMFT SRAEYRLMLR EDNADLRLTE IGRQLGMVDD ERWARFNEKL ENIEKERQRL 
RGIFVHPQSG QIEQVNVLLK TPLSREASGE DLLRRPEIDY AMLTRLPMFS PALVDAQAAE 
QVEIQVKYEG YIARQQDEID KQSRNENTLL PADLDYRQVS GLSNEVIAKL NDHKPSSIGQ 
ASRISGITPA AISILLVWLK KQGLLRRSA