| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_3976 |
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| Symbol | rbsC |
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| ID | 8087366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | - |
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| Start bp | 4612052 |
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| End bp | 4613020 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644838072 |
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| Product | ribose ABC transporter permease protein |
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| Protein accession | YP_002989551 |
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| Protein GI | 242241370 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.144441 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTTCTC AAACTATCCC GGCTAAGCGC CGGTTCAGCA AGCAGTGGTT GATGGAGCAG
AAGTCCCTGA TCGCCTTACT GGTGCTCATT GCCGTGGTCT CTTCCATGAG CCCCAATTTC
TTCACGCTGA ATAATTTGTT CAATATTCTG CAGCAGACAT CGGTCAACGC CATTATGGCC
GTCGGGATGA CGCTGGTGAT CCTGACTTCC GGCATCGATT TGTCCGTTGG GTCGGTGTTG
GCGCTGACGG GCGCGGTGGC CGCGTCTATC GTCGGGCTGG AGATCAATGC GTTGGTGGCG
GTGTTCGCCG CTCTGGCGCT GGGTGCCGTT ATTGGCGCCG GTACCGGGAT TATCGTCGCC
AAAGGCCGGG TTCAGGCGTT TATCGCCACG TTGGTCATGA TGCTGCTGTT ACGTGGCGTC
ACCATGGTTT ATACCAACGG CAGCCCGGTT AATACCGGAT TTTCCTCAGC AGCGGACACT
CTGGGGTGGT TCGGCATCGG TCGTCCTTTT GGCGTACCTG CGCCAATCTG GATTATGGCA
GTGGTGTTTT TGGCGACCTG GTACATGCTG CACCATACCC GTCTCGGGCG TTATATCTAT
GCGCTTGGCG GCAATGAAGC GGCAACACGC CTTTCCGGCA TCAGTGTTGA TAAGGTGAAG
GTGGTGGTGT ACTCGCTGTG CGGCTTGTTA TCGGCGTTGG CGGGCATTAT TGAAGTGGCT
CGCTTGTCGT CGGCGCAGCC AACGGCAGGG ACAGGTTATG AACTGGATGC CATCGCTGCG
GTGGTGCTGG GGGGGACGAG CCTGTCCGGT GGTAAAGGGC GCGTGGTGGG AACGTTGATC
GGGGCTCTGA TTCTGGGGTT CCTGAACAAT GGGCTTAACC TGTTAGGTGT TTCTTCTTAC
TACCAGATGA TCGTCAAGGC TGTCGTTATT TTGCTGGCGG TTTTGGTAGA TAACAAAAGC
AGTAAATAA
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| Protein sequence | MSSQTIPAKR RFSKQWLMEQ KSLIALLVLI AVVSSMSPNF FTLNNLFNIL QQTSVNAIMA
VGMTLVILTS GIDLSVGSVL ALTGAVAASI VGLEINALVA VFAALALGAV IGAGTGIIVA
KGRVQAFIAT LVMMLLLRGV TMVYTNGSPV NTGFSSAADT LGWFGIGRPF GVPAPIWIMA
VVFLATWYML HHTRLGRYIY ALGGNEAATR LSGISVDKVK VVVYSLCGLL SALAGIIEVA
RLSSAQPTAG TGYELDAIAA VVLGGTSLSG GKGRVVGTLI GALILGFLNN GLNLLGVSSY
YQMIVKAVVI LLAVLVDNKS SK
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