| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_3953 |
|---|
| Symbol | |
|---|
| ID | 8087339 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 4581420 |
|---|
| End bp | 4582808 |
|---|
| Gene Length | 1389 bp |
|---|
| Protein Length | 462 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644838045 |
|---|
| Product | uracil-xanthine permease |
|---|
| Protein accession | YP_002989528 |
|---|
| Protein GI | 242241347 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG2233] Xanthine/uracil permeases |
|---|
| TIGRFAM ID | [TIGR00801] uracil-xanthine permease
[TIGR03173] xanthine permease |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTATTT CCGCCACCGA GATACCTCAG TCCAGCCCCG AAACCACGGC GCGCAGCGAA
CTGATTTACC GTCTGGAGGA CAGGCCTCCA CTACCGCAAA CCCTATTTGC CGCCTGTCAG
CATTTGCTGG CGATGTTTGT CGCCGTGATT ACCCCGGCGT TGCTGATTTG CCAGGCGCTC
GGCTTGCCGG CGCAGGATAC CCAGCACATC ATCAGTATGT CGCTGTTCGC CTCCGGCGTG
GCGTCTATTC TGCAAATCAA AACCTGGGGG CCGGTCGGGT CTGGCCTGCT TTCGATTCAA
GGCACCAGCT TCAACTTCGT GACGCCGTTG ATCATGGGCG GTATGGCGCT GAAAAACGGT
GGAGCGGATG TTCCCACCAT GATGGCGGCG CTGTTCGGCA CCTTGATGGT CGCCTCCTGC
ACCGAGATGT TGCTGTCCCG CGTGCTGCAT CTGGCGCGCC GCATCATCAC TCCGCTGGTA
TCCGGTATTG TGGTAATGAT TATCGGCCTG TCGCTGATTC AGGTCGGGTT AACCTCTATC
GGCGGCGGTT TCGCCGCCAT GGGCAACCAC ACCTTCGGCG CGCCGAAAAA CCTGTTGCTG
GCCGGGATCG TGCTGGCCGT CATCATCCTC CTGAATCGTC AGCGCAACCC TTACCTGCGC
GTGGCGTCGC TGGTGATCGC CATGGCGGTG GGCTATCTGG CGGCCTGGCT GATGGGTATG
CTGCCGGGTA ACGCGCCGTC GTCGGCCTCG GCCCTGATTA TGGTGCCAGC GCCGATGTAT
TACGGTCTTG GCTTCGACTG GAATCTGCTG GTGCCGTTGA TGCTGGTTTT CATGGTGACA
TCGCTGGAAA CCATCGGCGA CATCACCGCC ACCTCCGACG TTTCCGAGCA GCCGGTCAGC
GGGCCGCTAT ACATGAAGCG ATTGAAAGGC GGGGTGCTGG CCAACGGCCT GAACTCCTGT
GTATCCGCCA TCTTCAATAC CTTCCCCAAC TCCTGCTTCG GCCAGAACAA CGGCGTCATC
CAGCTGACCG GCGTCGCCAG CCGTTATGTG GGTTTTGTGG TAGCGCTGAT GCTGATCGTG
TTGGGGCTCT TTCCGGCGGT AAGCGGGTTT GTGCAGCATA TTCCCGAGCC GGTGCTGGGC
GGTGCGACCA TCGTAATGTT CGGCACCATC GCCGCCTCCG GTGTGCGCAT CGTCTCCCGC
GAACCGCTGA ACCGCCGCGC CATCATGATT ATCGCGTTGT CTCTGGCCGT TGGTCTGGGT
GTCTCGCAGC AGCCGTTAAT TTTGCAGTTT GCGCCTGATT GGCTGAAAAC CCTGCTCTCT
TCCGGTATTG CTGCGGGCGG CATCACAGCC ATCGTGTTAA ATCTGATGTT CCCCCACGAG
AAAGAATAA
|
|---|
| Protein sequence | MSISATEIPQ SSPETTARSE LIYRLEDRPP LPQTLFAACQ HLLAMFVAVI TPALLICQAL
GLPAQDTQHI ISMSLFASGV ASILQIKTWG PVGSGLLSIQ GTSFNFVTPL IMGGMALKNG
GADVPTMMAA LFGTLMVASC TEMLLSRVLH LARRIITPLV SGIVVMIIGL SLIQVGLTSI
GGGFAAMGNH TFGAPKNLLL AGIVLAVIIL LNRQRNPYLR VASLVIAMAV GYLAAWLMGM
LPGNAPSSAS ALIMVPAPMY YGLGFDWNLL VPLMLVFMVT SLETIGDITA TSDVSEQPVS
GPLYMKRLKG GVLANGLNSC VSAIFNTFPN SCFGQNNGVI QLTGVASRYV GFVVALMLIV
LGLFPAVSGF VQHIPEPVLG GATIVMFGTI AASGVRIVSR EPLNRRAIMI IALSLAVGLG
VSQQPLILQF APDWLKTLLS SGIAAGGITA IVLNLMFPHE KE
|
|---|
| |