| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_3950 |
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| Symbol | |
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| ID | 8087336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | + |
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| Start bp | 4576210 |
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| End bp | 4578312 |
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| Gene Length | 2103 bp |
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| Protein Length | 700 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644838042 |
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| Product | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase |
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| Protein accession | YP_002989525 |
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| Protein GI | 242241344 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.273861 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTATCTGT TTGAAAGCCT CAATCTGCTG ATTCAGCGGT ATCTGCCGGA AGACCAGATA
CAGTGTCTCA AGCAGGCCTA TATCGTTGCA CGTGATGCCC ACGAGGGGCA GACACGCTCC
AGCGGCGAGC CCTACATCAC GCACCCGGTC GCCGTCGCCT GTATTCTGGC GGAAATGCGT
CTCGACTATG AAACGCTAAT GGCGGCGTTG CTGCATGATG TTATCGAAGA TACGCCGGCA
ACCTACCAAG ATATCGAGCG CTTGTTCGGC AAAAGCGTAG CCGAACTGGT GGAAGGCGTA
TCCAAACTCG ACAAGCTGAA ATTTCGCGAC AAGAAAGAGG CGCAGGCAGA GAACTTCCGC
AAGATGATCA TGGCGATGGT GCAGGACATC CGCGTCATCC TGATCAAACT GGCGGATCGT
ACCCACAACA TGCGCACCCT CGGGTCGCTT CGACCGGACA AACGCCGTCG TATCGCCCGT
GAAACGCTGG AAATCTATAG CCCGCTGGCG CATCGCCTCG GTATTCACCA TCTGAAAACC
GAGCTGGAAG AACTGGGTTT CGAAGCACTC TATCCCAATC GTTATCGTGT CATCAAAGAA
GTGGTGAAAG CCGCCCGCGG CAACCGCAAA GAGATGATCC AGAAAATCCT CTCCGAAATA
GAGGGACGAT TAAAAGAGGC CGGGATTTCC TGTCGTGTCA GCGGTCGGGA AAAACACCTC
TACTCCATCT ACTGCAAAAT GCACCTGAAA GAACAGCGTT TTCACTCCAT CATGGATATC
TACGCATTTC GGGTGATCGT CAAGGAAGTG GATACCTGTT ACCGGGTGCT GGGCCAGGTA
CATAGCCTGT ACAAACCGCG CCCAGCGCGG GTAAAAGATT ATATCGCCAT CCCCAAAGCC
AACGGTTATC AGTCGCTGCA TACCTCGTTG ATCGGGCCGC ATGGCGTGCC GGTCGAAGTG
CAAATCCGTA CCGAAGACAT GGATCAGATG GCGGAAATGG GCGTGGCGGC GCACTGGGCC
TATAAAGAAG GCGAAAGCAG CAGCACTACG GCGCAGGTTC GCGCCCAGCG TTGGATGCAA
AGCCTGCTGG AACTGCAACA GAGTGCGGGC AGTTCCTTCG AATTCATCGA AAGCGTGAAA
TCCGATCTGT TTCCGGACGA AATTTACGTA TTTACCCCGG AAGGCCGCAT CGTACAGTTG
CCGGCCGGCG CCACGCCGGT GGACTTCGCC TATGCCGTGC ATACCGACAT CGGCCATGCT
TGCGTCGGCG CTCGCGTCGA TAGGCAGCCT TATCCGTTAT CCCAGGCGCT TTCCAGCGGT
CAGACCGTGG AGATCATCAC GGCTCCAGGC GCTCGTCCAA ACGCAGCCTG GCTCAATTTT
GTAGTCAGTT CCAGGGCTCG CGCCAAAATT CGCCAGATGT TGAAAAACCT CAAGCGTGAC
GATTCCGTCA GCCTGGGGCG CCGTCTGCTG AACCATGCAT TGGGCAACGG GCGCAAACTG
TCCGATATCC CCGAGAAGAA TATTCAGCGC GAGCTGGAGC GCATGAAACT GCCGGCGCTG
GACGATTTAC TGGCGGAAAT CGGTCTTGGC AACGCCATGA GCGTCGTCGT GGCCCGCAAT
CTGTTGGAAG AAAATACCGA ACTCACCGAT GCCGGTATCC GCAAACTGCC TATCAAGGGT
GCCGATGGCG TACTGATTAC CTTCGCCAAG TGCTGCCGTC CTATTCCCGG CGATCCGATT
ATCGCCCACG TCAGCCCAGG CAAAGGGCTG GTTATCCATC ATGAATCCTG TCGCAATATT
CGCGGCTATC AGAAAGAACC TGAAAAATTC ATGGCGGTAG AATGGGATGA AGTCACCGAG
CAGGAGTTCA TCGCTGAAAT CAAGGTGGAT ATGCTCAACC ATCAGGGCGC GCTGGCCAAC
CTGACGGCGG CGATCAGCGC GTCCAACTCC AATATTCAGA GCATCAATAC CGAGGAAAAG
GACGGCAGGG TATACAGCGC CTTTATCCGC CTCACCACGC GCGATCGTGT TCACCTGGCG
AACATTATGC GTAAAATTCG CGTGATGCCG GATGTGATTA AAGTTAACCG TAATCGAAAC
TGA
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| Protein sequence | MYLFESLNLL IQRYLPEDQI QCLKQAYIVA RDAHEGQTRS SGEPYITHPV AVACILAEMR
LDYETLMAAL LHDVIEDTPA TYQDIERLFG KSVAELVEGV SKLDKLKFRD KKEAQAENFR
KMIMAMVQDI RVILIKLADR THNMRTLGSL RPDKRRRIAR ETLEIYSPLA HRLGIHHLKT
ELEELGFEAL YPNRYRVIKE VVKAARGNRK EMIQKILSEI EGRLKEAGIS CRVSGREKHL
YSIYCKMHLK EQRFHSIMDI YAFRVIVKEV DTCYRVLGQV HSLYKPRPAR VKDYIAIPKA
NGYQSLHTSL IGPHGVPVEV QIRTEDMDQM AEMGVAAHWA YKEGESSSTT AQVRAQRWMQ
SLLELQQSAG SSFEFIESVK SDLFPDEIYV FTPEGRIVQL PAGATPVDFA YAVHTDIGHA
CVGARVDRQP YPLSQALSSG QTVEIITAPG ARPNAAWLNF VVSSRARAKI RQMLKNLKRD
DSVSLGRRLL NHALGNGRKL SDIPEKNIQR ELERMKLPAL DDLLAEIGLG NAMSVVVARN
LLEENTELTD AGIRKLPIKG ADGVLITFAK CCRPIPGDPI IAHVSPGKGL VIHHESCRNI
RGYQKEPEKF MAVEWDEVTE QEFIAEIKVD MLNHQGALAN LTAAISASNS NIQSINTEEK
DGRVYSAFIR LTTRDRVHLA NIMRKIRVMP DVIKVNRNRN
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