Gene Dd703_3921 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3921 
Symbol 
ID8087306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp4543638 
End bp4545224 
Gene Length1587 bp 
Protein Length528 aa 
Translation table11 
GC content65% 
IMG OID644838012 
ProductFGGY-family pentulose kinase 
Protein accessionYP_002989496 
Protein GI242241315 
COG category[C] Energy production and conversion 
COG ID[COG1069] Ribulose kinase 
TIGRFAM ID[TIGR01234] L-ribulokinase
[TIGR01315] FGGY-family pentulose kinase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGACG ATTGCTTCAT CGGCGTGGAT GTCGGGTCGG CTAGCGTCAG AGCCGGCATT 
TTTGACGGCA GCGGTCGGCG TCTGGCGTTC GCGGTGCGGC CGATAGAACA GTTTCATCCC
CGTACCCATG TGGTGGAGCA ATCTTCTACG GATATCTGGC GAGCGGCGGG CGAATGCGTG
CGGGAAGCGT TGCGTTGTGC CGACATCGCG CCAGCTCGGG TGCGTTCCAT CGGGTTTGAC
GCGACCTGCT CGCTGGTGGC GGTAGGCGCT GACGGCCAGC CGGTCTCTGT TGCGGAACAG
GACGCCGCCG AGCGGGACAT CATCATGTGG ATGGATCATC GCGCCGCCGT CGAAACCGCC
GACATCAACG CCACCGGCGA TGACGCGCTG CGCTATGTGG GCGGCGAGGT CAGCATTGAA
ATGGAGCTGC CCAAGATCCT GTGGCTGAAG CGCCATTTCC CGGCGCGTTA TCAACAAGTG
CGGCGCTTTT TCGATCTGGC GGATTATCTG GTGTGGCGTG CCACCGGTAC GGATGCGGCC
AGTGTCTGCA CCCTGACCTG CAAATGGAAC TATCTGGCGC ACGAAGCGCG CTTCAGCGAC
AGCCTGTTGC AGGCTATCGG TCTGACGGAT CTGCGGGAAA AGATCCCGGC CCGCATTTTG
CCGCTGGGGG CATGCGCCGG AACGCTGGCG AAATCGGTCG CCCGCGACTG GGGGTTGCCG
GAAAACGTCG CGGTTGCCAG CGGTATCATC GATGCGCACG CCGGCGGGCT GGCGCTGGTG
GGCAGCCAGC CGGAAGGCAG CCTGGCCATC ATCAGCGGTA CCTCCAACTG CCACATGCTG
GTCAGCCGGG ACGCGGTGGA GGTGCCCGGC GTGTGGGGGC CGTACTGGGG CGCGATGCTG
CCGCAGTGGT GGCTGAACGA AGGCGGTCAG AGTGCGGCCG GTGCGCTGAT GGAGTGGACG
CTGCGCCAGC ATGCGCAGTG GCCGGAACTG GCGGCGTGGG CTGAACGGCA ACGGCGCAGC
CCGTATGAGG TGCTGAATAC GTGGGTGGCG GCGCTGGAAC AGCGTGAACC GCAACCGACC
CGTCATCTGC ATGTCCTCGC CGATCATCAC GGCAACCGTT CACCGCGCGC CAATCCCCAC
GCTCGCGGCA TGGTAATGGG GCTGACGTTG GAGCAAGGGC CGGATGCGCT GGCTCGGTTA
TATCTGGCGA CGCTGCAAGG GATCGCCTAC GGCACCCGAC ACATTATCGA TGCCCTGAAT
CAGGCCGGGC ACCGCATTTC CCGGCTGGTG ATGTGCGGCG GCGCCACCAA GAATCCGCTA
TGGCTACGGG AGTACGCCGC CATCACCGGC TGCGATATCC AATTGGTGGG GGAGGAGGAT
GCGGTGACGC TGGGGGCGGC GTTACTCGGC GCGGTGGCCT GCGGCGCCTA CGCCTCGCTG
CCGGACGCGG CGGCGGCGCT GGTGCGGCCC GGCGAACGAA TCCTCGCTGA TCGCACCATG
CAACAGTTTC ATGACGACAA GTACCGGATT TATTTGCAGA TGTATGACTA TCAGCAGTCG
GCCTTACAGC TGATGGGGCG TAGCTGA
 
Protein sequence
MSDDCFIGVD VGSASVRAGI FDGSGRRLAF AVRPIEQFHP RTHVVEQSST DIWRAAGECV 
REALRCADIA PARVRSIGFD ATCSLVAVGA DGQPVSVAEQ DAAERDIIMW MDHRAAVETA
DINATGDDAL RYVGGEVSIE MELPKILWLK RHFPARYQQV RRFFDLADYL VWRATGTDAA
SVCTLTCKWN YLAHEARFSD SLLQAIGLTD LREKIPARIL PLGACAGTLA KSVARDWGLP
ENVAVASGII DAHAGGLALV GSQPEGSLAI ISGTSNCHML VSRDAVEVPG VWGPYWGAML
PQWWLNEGGQ SAAGALMEWT LRQHAQWPEL AAWAERQRRS PYEVLNTWVA ALEQREPQPT
RHLHVLADHH GNRSPRANPH ARGMVMGLTL EQGPDALARL YLATLQGIAY GTRHIIDALN
QAGHRISRLV MCGGATKNPL WLREYAAITG CDIQLVGEED AVTLGAALLG AVACGAYASL
PDAAAALVRP GERILADRTM QQFHDDKYRI YLQMYDYQQS ALQLMGRS