Gene Dd703_3910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3910 
Symbol 
ID8087295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp4531934 
End bp4533547 
Gene Length1614 bp 
Protein Length537 aa 
Translation table11 
GC content51% 
IMG OID644838001 
Productsensory histidine kinase DcuS 
Protein accessionYP_002989485 
Protein GI242241304 
COG category[T] Signal transduction mechanisms 
COG ID[COG3290] Signal transduction histidine kinase regulating citrate/malate metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAGA AGAAGGCACC GCTGAAACTG GGTACTTCGA TTATTCTGAT GGTATCGGCC 
GTGATCGGTT CGGTTCTGCT GGTGGTTTAT GCCCTGCTGT TTTTCCGTAT CAGTGAACTG
ACGGAAACCC ATCTCAAAGC CCGTGCTTTC GCCATTGCCC GCACGGTGGC GATGGCGCCC
GTGGTGATCA ATGACCTGAA GGATATCGGC GACCCGATGC GGGTTCAGCG GTTTTCGGAA
GAGGTGCGGC GTCGCAACCA TCTGCTGTTT GTCATCGTCA CGGATATGGG TGGGATCCGG
CATTCTCATC CCGAACCGGA TTTGATCGGG CGTCATTTCA TTGGCGACGA TCTTTATCCC
GCTTTGCTGG GGCTGGAGAA TACGGCGGTG AACCGTGGCG TGCTGGATCC GGCGTTGCGC
GTGTTCACGC CGGTGCTGGA TGAGAACGGC AAACAAATCG GCGTGGTTGC CGTGGGTATT
TCGTTGTCCA GCGTGCAATC GGTGATTGAT GAAAACCGCT GGATCATCCC CTGGACCATC
CTGTTCGGTG CGCTGGTCGG TCTGTTGGGC ACCTATTTTC TGGTTAAGGC GCTCAAGCGC
ATCATGCTGG GGTTTGAGCC GTTTGAAATT TCGAATTTGT TTGAGCAGCG TAATGCCATG
CTCAAGCAAA TCAAGGAAGG GGTGGTGGCG GTGGATACCG ATTTACGCAT TACCATCATC
AATGATGAAG CCAAACGATT GTTTAATCAG CATGATGGCG GAGAACGACT GGCGATAGGC
AAAGATATCA GTCACTGGCC GGCGTTGATG AATCTGGAAA AAGTGGTGAA AGCCGGCAAC
CCGCAGCAAG ATGAAGAGAT CAATTTCAAT GGCAATTTAC TGCTGACCAA CACCGTACCG
GTGGTGGTTA ATGGGGATAT TATCGGCGCT ATCGCCACCT TCCGCGATAA AACCGAGGTG
GGGCAGCTAA TACAACGCCT GACCGGCATT TCCTATTACG CGGACGCGCT GCGGGCGCAG
TCCCATGAGT TCATGAATAA GTTGCATGTG ATACTTGGCA TGCTGCATTT AAAATATTAC
CCGCAGTTGG AAGAATATAT TCTGAAAACC GCCAATAATT ATCAGACGGA AATCGGTTCA
ATCATTCGCA AAGTGAAATC CCCGGTGATT GCGGGCTTTC TGTTAGGTAA AATCAACCGC
GCCAGGGATC TGGGTATTAC GTTGTCCATC AGTGAGGATA GCCTGCTGCC TGATACGGAT
GACGCGCAGG TGACGAATGA ATTGATTACC GTACTGGGCA ATCTGATCGA GAATGCGATG
GATGCCATGG CTGGCCTGGA AAATCGGGAA ATCGTCGTGA CATTCCACCA TCGCAATAAT
TGTCTGCATT GTTCGGTCAG CGATGATGGC CCCGGCATTC CATGGGATGT ACAGCAGCAT
ATTTATCAGG AAGGTTTTTC GACCAAAGGC AGCGGACGCG GTATCGGCCT GCATCTGACC
AAGCAGAGTC TGGAGAAAAT AGGCGGTACC ATTGATTTTG AATCCGAACC GGATGTTTAT
ACTCAGTTTT TCGTAATTAT TCCTTATCAG GCAAGGCAGT TTGACCATGA TTAA
 
Protein sequence
MSKKKAPLKL GTSIILMVSA VIGSVLLVVY ALLFFRISEL TETHLKARAF AIARTVAMAP 
VVINDLKDIG DPMRVQRFSE EVRRRNHLLF VIVTDMGGIR HSHPEPDLIG RHFIGDDLYP
ALLGLENTAV NRGVLDPALR VFTPVLDENG KQIGVVAVGI SLSSVQSVID ENRWIIPWTI
LFGALVGLLG TYFLVKALKR IMLGFEPFEI SNLFEQRNAM LKQIKEGVVA VDTDLRITII
NDEAKRLFNQ HDGGERLAIG KDISHWPALM NLEKVVKAGN PQQDEEINFN GNLLLTNTVP
VVVNGDIIGA IATFRDKTEV GQLIQRLTGI SYYADALRAQ SHEFMNKLHV ILGMLHLKYY
PQLEEYILKT ANNYQTEIGS IIRKVKSPVI AGFLLGKINR ARDLGITLSI SEDSLLPDTD
DAQVTNELIT VLGNLIENAM DAMAGLENRE IVVTFHHRNN CLHCSVSDDG PGIPWDVQQH
IYQEGFSTKG SGRGIGLHLT KQSLEKIGGT IDFESEPDVY TQFFVIIPYQ ARQFDHD