Gene Dd703_3848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3848 
Symbol 
ID8087233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp4455952 
End bp4456935 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content49% 
IMG OID644837939 
Productintegrase family protein 
Protein accessionYP_002989423 
Protein GI242241242 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.250043 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATTA AGAAACTCGA TGATGGTCGA TATGAAGTGG ACATTCGCCC GATAGGACGT 
AACGGAAAAC GCATCCGGCG GCGGTTTGAG AAAAAGACAG AAGCGGTAGC ATTCGAACGC
TACACGTTGT CCAGAGCGGA CAAAAAAGAG TGGCAGCACG GTTATGGCGT TGAACATCGC
CAGCTCAGTG AACTGGTTGA ATTATGGTGG CTTTACTACG GCCAGAATCT GAAGAATGGT
TTGATAGAAA AGCGTCACCT GAAACGGACA GCGGCCCAGA TGGACGACCC GGAGATATGC
CGGATAAACA AGCGTTCAAT TCTGGAATTC CGTACCCGGC GATTATATGA CGGTATCAGC
TCTTCAACGG TCAATCGGGA CATCTACCGG CTTTCCGGGA TGTTTTCGGC ACTGATAAAA
CTGGAGATCT ACACCGGCGA GAATCCCTTA AAGGAATTGC CACCGTTGCC AGAAAAGCAG
CCAACAGTCA CTTTCCTGAC TGAATCAGAG ATTGCACGCC TGCTGGATAC GATGGAAGGC
GATCAATACC GGCTGGCTGT GCTGTGCCTG AGTACCGGCG CAAGGTGGGG AGAAGCCAGC
ACATTACGGG CTGAACAGGT GATGCATAAC CGGGTGACGT TTACCGAAAC CAAGAACGGT
AAAAACAGAA CCATTCCGAT ATCGGAAGAG GTTACGCGGA TCATCAAAAC CCGTGAAACC
GGAAAGTTGT TTAAAGTGGA CTACTCGGCA TTTTGCGAGC AAATCAAAGC GGTAAAACCC
GATATTCCGA AAGGCCAGGC ATCACACATA CTACGGCACA CATTTGCCAG CCATTTTGTG
ATGAACGGGG GAAATCTGGT GGCATTACAG CAGATTTTAG GTCATGCCAG CATTCAGCAA
ACCATGACTT ACGCGCATCT TGCACCGGAC TATCTGCAAA ACGCTATAAC ACTCAACCCA
TTACGGGGAA AAATAGCGGT TTAG
 
Protein sequence
MAIKKLDDGR YEVDIRPIGR NGKRIRRRFE KKTEAVAFER YTLSRADKKE WQHGYGVEHR 
QLSELVELWW LYYGQNLKNG LIEKRHLKRT AAQMDDPEIC RINKRSILEF RTRRLYDGIS
SSTVNRDIYR LSGMFSALIK LEIYTGENPL KELPPLPEKQ PTVTFLTESE IARLLDTMEG
DQYRLAVLCL STGARWGEAS TLRAEQVMHN RVTFTETKNG KNRTIPISEE VTRIIKTRET
GKLFKVDYSA FCEQIKAVKP DIPKGQASHI LRHTFASHFV MNGGNLVALQ QILGHASIQQ
TMTYAHLAPD YLQNAITLNP LRGKIAV